Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01743 ATGGCAACTGCAACATCTGGTGCTGTGTTAAATGGGTTAGGATCTTACTTCTTGTGTGGAGAAAAGAAGAGCCAAAGCTTGCTGGCTGCTGCTATTGGAGGCAAAGTTGGTGGTGGTACTGTTAGTCCTAAAAGAGTTATTGTAGCTGTTGCTGCTGCACCAAAGAAGTCATGGATCCCTGCTGTAAAAGGTGGTGGAAACTTCATTGACCCAGAATGGCTTGATGGCTCGCTACCAGGCGACTTTGGTTTTGACCCATTAGGCCTAGGCAAGGACCCAGCATTCCTCAAATGGTACAGAGAAGCTGAGCTCATCCATGGGAGGTGGGCAATGGCTGCAGTTGTAGGCATCTTTGTTGGCCAGGCATGGAGTGGAGTTCCATGGTTTGAAGCTGGAGCTGATCCTAATGCTATTGCTCCTTTTTCCTTTGGTTCTCTTCTGGGTACTCAATTGCTTCTCATGGGATGGGTTGAGAGCAAGAGATGGGTGGACTTCTTCAACCCGGATTCACAGTCAGTGGAATGGGCCACACCATGGTCAAGAACTGCTGAGAACTTTGCCAATGCTACTGGTGATCAAGGCTACCCTGGTGGAAAATTCTTTGACCCTTTGGGCTTTGCTGGCACAATCAAGGATGGAGTTTACAGTCCAGATGGAGAGAAGCTAGAAAGACTGAAATTGGCTGAGATTAAGCATGCTAGGATTGCTATGTTGGCTATGCTCATTTTCTACTTTGAGGCTGGACAAGGGAAGACACCTCTTGGTGCTCTTGGCTTGTAA 780 0.4782 MATATSGAVLNGLGSYFLCGEKKSQSLLAAAIGGKVGGGTVSPKRVIVAVAAAPKKSWIPAVKGGGNFIDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANATGDQGYPGGKFFDPLGFAGTIKDGVYSPDGEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01743 259 FunFam Chlorophyll a-b binding protein, chloroplastic 71 258 - -
Rops2g01743 259 Gene3D Chlorophyll a/b binding protein domain 71 258 - -
Rops2g01743 259 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 70 257 IPR001344 GO:0009765|GO:0016020
Rops2g01743 259 SUPERFAMILY Chlorophyll a-b binding protein 68 259 - -
Rops2g01743 259 Pfam Chlorophyll A-B binding protein 71 247 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01743 Rops-Chr2 26768097 26769510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01743 1 259 Chloroplast and Mitochondria Gene Families AT1G15820 83.462 1.66e-154 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01743 K08917 - gmx:100783223 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01743 2 26768097 26769510 Rops11g00255 11 3470476 3471539 PCT