Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01741 ATGGATGTTTTATCCTTAAACTCAAGCCTTAACATTTCAAAACCATTTCATTGCCTTCCACTATCAAGTAAGCAGAATAGAACTTCTCAGGTTCACTTTGCTGTTTCATGTAGAGCCACAAAGCTGAAGGGTTTGAATGAGACCACCAATGGAAACTTTTATAAATTACTGTCTCTGAGTCCTGCAAGTGCTACAATGGATGAGATAAAAAAAGCTTATAGATCAATGGCTCTTCAGTACCACCCTGATGTGTGCCATGATCCTTCAATTAAAGAGGAGTCAACAAGGATGTTTGTTCAGCTAAATGAAGCTTACGAGACATTGTCTAATCCTATGCTTCGAGCACAATATGATTGTGAATTGGGTTTGGGAAGCAGAATGAATGTTAGTGATGAGAGATGGAGAAATCATAGGTGGCAGGAGCAAGTGGTTGTTGAGTTGAAGAAAAGTTCTTGCAGACGTATGGGACAAAAAAGGGGATCAATGGGCAGTAGAATGAGGACCCAAAAACATGAAAGATAG 522 0.3946 MDVLSLNSSLNISKPFHCLPLSSKQNRTSQVHFAVSCRATKLKGLNETTNGNFYKLLSLSPASATMDEIKKAYRSMALQYHPDVCHDPSIKEESTRMFVQLNEAYETLSNPMLRAQYDCELGLGSRMNVSDERWRNHRWQEQVVVELKKSSCRRMGQKRGSMGSRMRTQKHER* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01741 173 SMART dnaj_3 51 113 IPR001623 -
Rops2g01741 173 Pfam DnaJ domain 52 118 IPR001623 -
Rops2g01741 173 MobiDBLite consensus disorder prediction 152 173 - -
Rops2g01741 173 PRINTS DnaJ domain signature 93 113 IPR001623 -
Rops2g01741 173 PRINTS DnaJ domain signature 73 88 IPR001623 -
Rops2g01741 173 PRINTS DnaJ domain signature 55 73 IPR001623 -
Rops2g01741 173 CDD DnaJ 52 110 IPR001623 -
Rops2g01741 173 ProSiteProfiles dnaJ domain profile. 52 121 IPR001623 -
Rops2g01741 173 SUPERFAMILY Chaperone J-domain 49 117 IPR036869 -
Rops2g01741 173 ProSitePatterns Nt-dnaJ domain signature. 98 117 IPR018253 -
Rops2g01741 173 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 24 172 - -
Rops2g01741 173 Gene3D DnaJ domain 40 146 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01741 Rops-Chr2 26736438 26737182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01741 54 118 C2H2 Transcription Factor Family AT1G74250 44.776 2.45e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01741 - - gmx:100811478 200.29