Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01730 ATGGATGAGTTGTCAAAGAACCAGATATTGGCAGTTCATGCGATTGGTGGTGCTGGGTCAGTGGCTTTAGCCACAGCTTTAACCTATCCTCTTGACACCCTCAAAGTCCTCACTCAGGTTGGTTCCACTGCCACTACAGATTTGAACGCTCCCCAGATTCTGATGAGAACACTCTCTGTCTCTGGCAATGCAGGTCTGTTCAGTGGTTTTGGCTGGTTAGCATTTGGAAGGATTTTTGGTCTGGGAGCACGATTTGGGGTTTATGAAATCTTGACAGCCTTTGTTAAAGATGGTCGAGAAGATAACTATGTCTCTGCTTCTGAGGCTCTTTTGTCTGGCATGGCAGCTGGTGCCATAGAGACATTCATAAGCTCTCCATTTGAGCTCATCAAGCTTCGTATGCAGGTTACCGCTGCTTCATTCACTCCAAGCTCTAACTTTGCTTTGGAAGAGGGGCCCCGCAAGCCTTTAATTGCAAGATTACTTAAGGGTTGCTATCCAGACAAGAGATCCTTGAACCAATATGTTGGTCTCATCTCCACCCTAACAACCAAAAATACTAACATGACGGGTGCTCTACTGGAGTATCCTTGGGCAATGACAGGATCTGGGAGACCTCCATCAGTTTGCAATGTGAGAAGGCCATCAGACATTGCATCTTTGGAAGGATGGAGCACATTATGGAGAGGTCTCCGTTCTGGAATTGTCCGAGATTCTGTGTTTGGTGGCATATTTTTTTCGAGTTGGCAATTTTTGCACCAAACAATGCTTGATTGGAAGGCTGCAGGGATGAATCCTCCACCCAGGTTAAATGATGAGGTTGGTCCGTTGTCTCCTTTGGCTGTTAGTCTTGCTGCTGGATTTTCATCTTCAGTTGCTGCCGCAGCTTCTCATGGTTTTGATACTGCAAGAAGTAGATCACAATGTACTGTGCTGACAAAGTATATCTCAATGGAGAGAAGGCTTCTGAAGTGGAAACGACCAGGAAACAGGTTGGAAAGAATTACTGGGATCCATCCTTCTGACAGGAATGTCTTGTTCCGTGGTATTGGGTTCCGGATGGCTCGCTCTGGTATTGCATCATTCATGATTGTAGGAAGTTATTTCTTTGTTGTTGATCATCTTGCTTCTAGTTTGACTTAA 1143 0.4532 MDELSKNQILAVHAIGGAGSVALATALTYPLDTLKVLTQVGSTATTDLNAPQILMRTLSVSGNAGLFSGFGWLAFGRIFGLGARFGVYEILTAFVKDGREDNYVSASEALLSGMAAGAIETFISSPFELIKLRMQVTAASFTPSSNFALEEGPRKPLIARLLKGCYPDKRSLNQYVGLISTLTTKNTNMTGALLEYPWAMTGSGRPPSVCNVRRPSDIASLEGWSTLWRGLRSGIVRDSVFGGIFFSSWQFLHQTMLDWKAAGMNPPPRLNDEVGPLSPLAVSLAAGFSSSVAAAASHGFDTARSRSQCTVLTKYISMERRLLKWKRPGNRLERITGIHPSDRNVLFRGIGFRMARSGIASFMIVGSYFFVVDHLASSLT* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01730 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 255 IPR018108 -
Rops2g01730 380 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 17 370 - -
Rops2g01730 380 SUPERFAMILY Mitochondrial carrier 11 365 IPR023395 -
Rops2g01730 380 Gene3D Mitochondrial carrier domain 10 379 IPR023395 -
Rops2g01730 380 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 94 IPR018108 -
Rops2g01730 380 Pfam Mitochondrial carrier protein 12 95 IPR018108 -
Rops2g01730 380 Pfam Mitochondrial carrier protein 105 178 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01730 Rops-Chr2 26553050 26556670 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01730 29 258 Antiporters AT1G79900 22.642 4.53e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01730 - - tpra:123917368 632.869