Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01723 ATGTCCTTCATGGCCTCCACCGGAGCTAGAACTAATGGAATTTCACCTAACCATATTGAGATCCCTATCCATGCCAATGGTTTGGAGCCAAAACCAAGCCAAGGGGTTGAAGAGAGTAACATTGACTACTCTCAAAGGGCTCAGTGGCTTCGAGCAGCCGTGCTGGGTGCAAATGATGGGTTGGTCTCTGTTGCCTCATTGATGATGGGTGTTGGAGCTGTTAAGGAAGATGTCAGTGCCATGCTCATTGCTGGTTTTGCTGGGTTAGTAGCTGGAGCTTGTAGCATGGCAATTGGAGAGTTTGTCTCTGTGTACACTCAGTATGACATAGAGATCGCTCAGGTTAAAAGAGAGAGGGAAACTAATAACAATGGAGTGGATGAAGAAGCCCAAAGGGAGAAGCTTCCAAACCCATTTCAGGCTGCCCTAGCATCAGCACTAGCATTTTGTGTTGGTGCTTTTGTCCCACTTATAGCAGCTGTGTTTATAAGGAACCACAAGATTAGGCTTGGCGTTGTTGCTGCTGTGGCTAGCTTGGCATTGTTGGTATTTGGAGGGGTTGGAGCAGTGCTTGGAAAAACTCCAGTGAAGAAATCTTGTTTCAGAGTGCTGATCGGAGGCTGGATGGCCATGGCCATAACATTTGGCCTGTCCAAATTGATTGGCACTGCTGGACTTTAA 681 0.4728 MSFMASTGARTNGISPNHIEIPIHANGLEPKPSQGVEESNIDYSQRAQWLRAAVLGANDGLVSVASLMMGVGAVKEDVSAMLIAGFAGLVAGACSMAIGEFVSVYTQYDIEIAQVKRERETNNNGVDEEAQREKLPNPFQAALASALAFCVGAFVPLIAAVFIRNHKIRLGVVAAVASLALLVFGGVGAVLGKTPVKKSCFRVLIGGWMAMAITFGLSKLIGTAGL* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01723 226 CDD Nodulin-21 48 195 - -
Rops2g01723 226 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 35 221 IPR008217 GO:0005384|GO:0030026
Rops2g01723 226 Pfam VIT family 131 217 IPR008217 GO:0005384|GO:0030026
Rops2g01723 226 Pfam VIT family 50 130 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01723 Rops-Chr2 26465738 26466574 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01723 37 226 Nodulin-like Gene Family AT3G43660 67.368 2.85e-91 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01723 K22736 - gmx:100802489 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01723 2 26465738 26466574 Rops2g01723 2 26465738 26466574 ECH