Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01722 ATGGCCTCCATCGGAGCAAGAACTAATGGAATTTCACCTAACCATATTGAGATCCCTATCCATGCCAATGGTTTGGAGCCAAAACCAAGCCAAGGGGTTCAAGAGAACGTTGACTACTCTCAAAGGGCTCAGTGGCTTCGAGCAGCCGTGCTGGGTGCCAATGATGGGTTGGTCTCTGTTGCCTCATTGATGATGGGTGTTGGAGCTGTTAAGGAAGATGTCAGTGCCATGCTCATTGCTGGTTTTGCTGGGTTAGTAGCTGGAGCTTGTAGCATGGCAATTGGAGAGTTTGTCTCTGTGTACACTCAGTATGACGTAGAGATTGCTCAGATTAAAAGAGAGAGGGAAACTAATAACAATGGAGTGGATGAAGAAGCCCAAAGGGAGAAGCTTCCAAACCCATTTCAGGCTGCCCTAGCATCAGCACTAGCATTTTGTGTTGGTGCTTTTGTCCCACTTATAGCAGCTGTGTTTATAAGGAATCACAAGATTAGGCTTGGTGTTGTTGCTGCTATGGCTAGCTTAGCATTGTTGGTATTTGGAGGGGTTGGAGCAGTGCTTGGAAAAACTCCAGTGAAGAAGTCTTGTTTCAGAGTGCTGATCGGAGGCTGGATGGCCATGGCCATAACATTTGGCCTGTCCAAATTGATTGGCACTGCTGGACTTTAA 669 0.4694 MASIGARTNGISPNHIEIPIHANGLEPKPSQGVQENVDYSQRAQWLRAAVLGANDGLVSVASLMMGVGAVKEDVSAMLIAGFAGLVAGACSMAIGEFVSVYTQYDVEIAQIKRERETNNNGVDEEAQREKLPNPFQAALASALAFCVGAFVPLIAAVFIRNHKIRLGVVAAMASLALLVFGGVGAVLGKTPVKKSCFRVLIGGWMAMAITFGLSKLIGTAGL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01722 222 CDD Nodulin-21 44 191 - -
Rops2g01722 222 Pfam VIT family 127 213 IPR008217 GO:0005384|GO:0030026
Rops2g01722 222 Pfam VIT family 46 126 IPR008217 GO:0005384|GO:0030026
Rops2g01722 222 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 29 217 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01722 Rops-Chr2 26455204 26455872 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01722 23 222 Nodulin-like Gene Family AT3G43660 64.000 3.90e-90 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01722 K22736 - gmx:100802489 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01722 2 26455204 26455872 Rops2g01722 2 26455204 26455872 ECH