Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01721 ATGACTGCTAGTGCACCCTGTGGTTCGGTGTCACTCAACCATGAATTTGCAGTTCCAAATGGAGCCACAAATGGAATGGATCATAAGCAAACCCAAGTGACCGAAGATCATACAAATATTGATTACTGGCAAAGGGCTCAATGGCTTCGTGCTGCTGTATTAGGAGCCAATGATGGGTTGGTTTCTGTTGCTTCATTGATGATGGGTGTAGGAGCTGTTAAAACAGATGTTAAAGCTATGCTATTAGCTGGTTTTGCAGGTTTAGTTGCAGGAGCTTGTGGTATGGCAATAGGAGAGTTTGTTTCTGTGTACACTCAGTATGAAGTTGAGGTTGGTCAAATGAAGAGAGATATGAATATGAGTGACAAAGGAGATAAAAACTTGGAGATGGAGTTGGAGAAAAGGAAATCATTACCTAATCCATTGCAGGCTGCTTTGGCATCTGCATTCTCATTTTCTATTGGTGGTTTGGTTCCTTTACTTTCAGCTTCATTCATAAAAGCTTACAAGATTAGGGTTATTCTGATTGTGGCAATGGCTAGTTTGGCTTTGGTAGTTTTCGGAAGGGTGGGAGCTCAACTGGGAAAGACACCTCAGGTTAGGTCTTCTATAAGGTTCCTTCTTGGGGGATGGATGGCCATGGCTCTCACTTTTGGGTTAACCAAATTACTGGGTTCTACTGGTTTGGAATTATGA 696 0.4224 MTASAPCGSVSLNHEFAVPNGATNGMDHKQTQVTEDHTNIDYWQRAQWLRAAVLGANDGLVSVASLMMGVGAVKTDVKAMLLAGFAGLVAGACGMAIGEFVSVYTQYEVEVGQMKRDMNMSDKGDKNLEMELEKRKSLPNPLQAALASAFSFSIGGLVPLLSASFIKAYKIRVILIVAMASLALVVFGRVGAQLGKTPQVRSSIRFLLGGWMAMALTFGLTKLLGSTGLEL* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01721 231 CDD Nodulin-21 47 198 - -
Rops2g01721 231 Pfam VIT family 49 120 IPR008217 GO:0005384|GO:0030026
Rops2g01721 231 Pfam VIT family 127 221 IPR008217 GO:0005384|GO:0030026
Rops2g01721 231 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 30 224 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01721 Rops-Chr2 26443924 26444619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01721 35 229 Nodulin-like Gene Family AT3G43660 62.051 1.96e-83 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01721 K22736 - gmx:100791523 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01721 2 26443924 26444619 Rops2g01721 2 26443924 26444619 ECH