Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01712 ATGGTGGCAGTGCAGATCACATTTTCTGCTTGCAATGTGCTCTACAAACTTGCCATAAATGATGGAATGAGCACTATTGTGATTTCAGCTTATCGTCTCGCCGTCGCTGCACTCATCACTATTCCACTTGCTCTTATTTTTGAAAGGAAGACGAGACCGAAGATGACATGGAGGGTGTTTATCTTGGCAAATCTCAGTGGATTTGTTGGTGGAACTTTATTTCAAAACCTATTCTATGGGGCCTTGACTATGGCGTCAGCAACCCTTGTGTCCGCCATCTACAACCTTATTCCCACCATCACGTTCATCTTGGCCGTATCTGCCGGTTTCGAAAAACTAAATTGGGGAGCAACAACAGGAAAGGCCAAGGTTGTTGGAACTATACTTGGACTTGCTGGGGCAATGCTACTGACCTTTTACAAAGGGGTAGAATTTGATATTTGGCCCTTTTATGTCAACCTTTTGGATCCGCAACAGAGCCAAATTGAGCAAGTTGCTGATACTACTCAAGAATTATTGGGTGTTCTATGTGTCGTATTAAGCTGCTTTTGTTTCTCTGTGTGGCTGATCATTCAGGCTAAGATCAGTGCAGTATACCCATGCCCTCAGACAAGCATAGCTTTGATGTCTACAACTGGAACAATACAAAGCGTTATTTTTGGTTTTATTGTTGTGAGTGATGTGAACGAATGGAGAATGGGTTGGGATATAAGGCTCTTAACCGTTCTGTTTTCGGGAGTTTTGGCCTCCGGAGTAATGATTCTCTTCATTGCATGGGTCGTACAAACCAAAGGTCCTTTATTTGCATCGGCTTTCAACCCTCTAATGCTTCTGATTGTGGCTATTGTCGCTTCTATGTTGCTGGATGAGAAATTAAATCTAGGAAGTATACTTGGAGGAGTGCTGATTATTTTTGGCTTATACACGGTGCTATGGGGTAAGAACAAAGAAGTGCAAAAGAAGGCTCGTGAGTTAGAGCCATCAGAAACCACGGGAGATTCCGATGCTACGACGCCGTTGTTGGATCCATGA 1032 0.4341 MVAVQITFSACNVLYKLAINDGMSTIVISAYRLAVAALITIPLALIFERKTRPKMTWRVFILANLSGFVGGTLFQNLFYGALTMASATLVSAIYNLIPTITFILAVSAGFEKLNWGATTGKAKVVGTILGLAGAMLLTFYKGVEFDIWPFYVNLLDPQQSQIEQVADTTQELLGVLCVVLSCFCFSVWLIIQAKISAVYPCPQTSIALMSTTGTIQSVIFGFIVVSDVNEWRMGWDIRLLTVLFSGVLASGVMILFIAWVVQTKGPLFASAFNPLMLLIVAIVASMLLDEKLNLGSILGGVLIIFGLYTVLWGKNKEVQKKARELEPSETTGDSDATTPLLDP* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01712 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 316 - -
Rops2g01712 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 141 - -
Rops2g01712 343 PANTHER WAT1-RELATED PROTEIN 1 318 IPR030184 GO:0016020|GO:0022857
Rops2g01712 343 Pfam EamA-like transporter family 6 138 IPR000620 GO:0016020
Rops2g01712 343 Pfam EamA-like transporter family 173 311 IPR000620 GO:0016020
Rops2g01712 343 MobiDBLite consensus disorder prediction 322 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01712 Rops-Chr2 26260220 26266678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01712 1 335 Nodulin-like Gene Family AT1G25270 38.507 1.24e-79 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01712 - - mtr:25493309 526.168