Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01709 ATGGTATTTGTGCAGATTGCAATTGGATCGGTCAATATCATCTACAAGCTTGCCATAAATGATGGAATGAGCATGAGGGTGGCCACTGCCTACCGCTTCCTTTGTGCTTCGGCTTTCACTGTCCCCCTTGCTCTTATCTTTGATAGGAAGAAGAGACCAAAGATCACTTGGAGGGTGCTTTCCCTGGGATTTCTATGTGGATTGTTTGGGGGAAGTTTATATCTAAACCTTTACCTTGAGGCCCTGGCTTTAACGTCAGCAACGTTTATGTTGGCCGTGGTCAACCTTATTCCAGGCATTACCTTCATCATGGCTGTATGTTCTGGAATGGATAAATTAAATTTTGGACTAGCAGAAGGAAGGGCCAAGGTGATAGGAACAATAATTGGAATTAGTGGGGCCATGCTAATGACATTTTTCAAAGGGGTAGAACTTCATATTTGGTCTTCCAATATCAACCTCATGCATCCACATCCAAACAAAAATGGGCATATGGCATCACAACACTCAGACCTCCGTAGGAAACTGTTCGGTGTTCCATGTGCCATAGCAAGCAGTTGCTCTTTTGCTTTGTGGTTCATCATTCAGGTTAAGTTGAATGCAGAATACCCAAGTCATCACTCAAGCGCAGCTTTAATGACCACCATGGGAGCGATTCAGTCCACTATTATTGCTCTTTGTGTTGACAGGGATTGGAACCAATGGAAGGTGGATAATAATATCAGGCTTCTAACTGTGGTTTATCCGGGAATTGTGGTCTCTGGATTAGTGGTTATAGCTATTGCCTGGTGCATAAAAATGAGAGGCCCTCTATTTGCGTCTATTTTCAATCCTCTGCAACTTATGCTTGTGGCTGTCGCTGCTTATTTGATGTTGGATGAGAAATTATATTTAGGAAGTGTGCTTGGAGCAGTGATGATCGTGTGCGGTCTCTACGCTGTGCTTTGGGGTCAGAGCAAAGAAACGAAGAAGAACAAGTTAGTGCCATTAGAAATCACCGAAGAGTCTGAAAATGTTGAGCTTGTTGTTATGCCTATGCCTGGAGATCATCATAAATGTGTCCAAAGCTATCATAGTCAAGTCAGTGCTGCTGGGAATATTACTAATACTAAGTGA 1116 0.4292 MVFVQIAIGSVNIIYKLAINDGMSMRVATAYRFLCASAFTVPLALIFDRKKRPKITWRVLSLGFLCGLFGGSLYLNLYLEALALTSATFMLAVVNLIPGITFIMAVCSGMDKLNFGLAEGRAKVIGTIIGISGAMLMTFFKGVELHIWSSNINLMHPHPNKNGHMASQHSDLRRKLFGVPCAIASSCSFALWFIIQVKLNAEYPSHHSSAALMTTMGAIQSTIIALCVDRDWNQWKVDNNIRLLTVVYPGIVVSGLVVIAIAWCIKMRGPLFASIFNPLQLMLVAVAAYLMLDEKLYLGSVLGAVMIVCGLYAVLWGQSKETKKNKLVPLEITEESENVELVVMPMPGDHHKCVQSYHSQVSAAGNITNTK* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01709 371 PANTHER WAT1-RELATED PROTEIN 1 326 IPR030184 GO:0016020|GO:0022857
Rops2g01709 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 141 - -
Rops2g01709 371 Pfam EamA-like transporter family 9 138 IPR000620 GO:0016020
Rops2g01709 371 Pfam EamA-like transporter family 177 315 IPR000620 GO:0016020
Rops2g01709 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01709 Rops-Chr2 26049273 26054257 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01709 1 341 Nodulin-like Gene Family AT1G25270 40.469 9.98e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01709 - - gsj:114424758 496.508