Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01708 ATGGTATTTGTGCAAATTGCATTTGCTGCGGTCAATATCGTCTACAAGCTCGCAATAAATGATGGAATGAGCATGAGGGTAGCTACAGCCTATCGCCTCATCTTCGCATCGGCTTTCACTATCCCACTTGCTCTCATCTTTGATAGGAAGAAGAGACCAAAGATTACTTGGAGGGTGCTCTTTATGGCATTTCTCTGTGGCTTGTTCGGGGGAAGTTTATTTCATAACCTTTACGCCGAGGGCCTGGCTTTGGCATCAGCGACGTTTATGTTGGCCTTCATCAACCTTATTCCAGGCATTACCTTCATCATGGCCATATCCTGCAGATTGGAAAAATTAAATTTGGGAGTAGATGAAGGAAAGGCCAAGGTGATAGGAACAATAATTGGAATTAGTGGGGCAATGCTGTTGACCTTTTTCAAAGGAGAAGAAATTAATATTTGGTCTTCCAAAATTAACCTTATGCATCCACATCAGTACCAAAATGGGCATATGGGGTTGCAGCATGCAGACTTTCGGAGTAAACTGTTGGGTGTTACATGTGCCATAGGAAGCTGCTGCTCTTTTTCTTTGTGGTTCATCATCCAGGCTAAGATGAATGAAGAATACCCAAAACAGCACTCAAGCACTGCTTTAATGTCCACAATGGGAGCGATACAGGCAATTGTTCTTGCTCTTTGTGTTGATAGGGATTGGAGCCAGTGGAAGCTGGGTTTCAATATCAGGCTTCTAACAGTGGCTTATTCGGGAATTGTGACCTCTGGAATAGCGGTTATTGTTATTGCCTGGTGCATAAAGATGAGAGGCCCTCTATTTGCCTCTGTTTTTTATCCCCTACAGCTTTTAATCGTGGCTATCGCTGCTTATTTGTTATTGGATGAGAAGTTATATTTAGGAAGTGTTCTTGGAGCAGTGTTGATTGTGTGTGGCCTATACGCGGTGCTTTGGGGTAAGGACAAAGAAATTAAAAAGAAGACTCAGTTAGTGGCATTAGAAATCACCAGAGACTCCGAAGCTGTTGAGGTTGCTGTTATGTCCCCGCCCGTAAATCGTGATAAATGTGTCCAAAGCTACCAGTGTCAAACCAGGGAATGTTGCTAA 1101 0.4323 MVFVQIAFAAVNIVYKLAINDGMSMRVATAYRLIFASAFTIPLALIFDRKKRPKITWRVLFMAFLCGLFGGSLFHNLYAEGLALASATFMLAFINLIPGITFIMAISCRLEKLNLGVDEGKAKVIGTIIGISGAMLLTFFKGEEINIWSSKINLMHPHQYQNGHMGLQHADFRSKLLGVTCAIGSCCSFSLWFIIQAKMNEEYPKQHSSTALMSTMGAIQAIVLALCVDRDWSQWKLGFNIRLLTVAYSGIVTSGIAVIVIAWCIKMRGPLFASVFYPLQLLIVAIAAYLLLDEKLYLGSVLGAVLIVCGLYAVLWGKDKEIKKKTQLVALEITRDSEAVEVAVMSPPVNRDKCVQSYQCQTRECC* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01708 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 141 - -
Rops2g01708 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 319 - -
Rops2g01708 366 PANTHER WAT1-RELATED PROTEIN 1 322 IPR030184 GO:0016020|GO:0022857
Rops2g01708 366 Pfam EamA-like transporter family 6 138 IPR000620 GO:0016020
Rops2g01708 366 Pfam EamA-like transporter family 177 315 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01708 Rops-Chr2 25946103 25950823 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01708 1 352 Nodulin-like Gene Family AT1G25270 43.059 9.83e-102 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01708 - - gsj:114424758 520.776