Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01684 ATGGACAATTATCAAGGTGATTTAACTGACATAATCCGTGCTAGTGGTGCATCATACGGCAGCTGCAGCACAGGCACTTCATCATTTGAAACTGTTCCCTTCTCTATGGATCACTGGCAGTTCTCTTCTGCTCCTATCAATTTCTCTTCTGTTTTGGAAGACCCTTTTGGTGGTAACTTTGGTGATCCATTCTCAAACATGAAAGATCCCTTTCTACATGAGCTTATTATGCCTGGCTCTGCCAACACTGGGAGATTGGAAGAAGCAGCATGTTTTGGTGGTGGCAGCAGTGATCCTTGTGTTTTGGCACAAAAGATCATCCTTGAGGATGATATGAGAAGGCCTTGTAAATTGTCAAACATGATTCAGATCTCTCCCAATTCTAAGTTACCAATCTCATCCCAAGGTGATTCCACAGTGATGAATGCTTTGTCAAGGGTAGATAATAAGTCCTCTGCTGTGGTTTCAGTTTCAGATAAGATGATTAATGCAAAGACCTCTAAAGATCATTCCTTGGTGGGCAACACGGGAGTGCAGATCTCATCTCCACGGTATCCGGGTCTTAAGGGAAGGAAGAGTCAGGCAAAGAAGTCGATTTGTATTCCTGCACCAGCAGCAGCTCCAAACAGTAGACAAAGTGGGGAGGTAGTTCCTTCTGATATGTGGACTTGGAGAAAATATGGTCAGAAACCCATTAAAGGTTCTCCATATCCAAGGGCTTATTATAGGTGCAGTAGCTCAAAGGGTTGTCCAGCTAGGAAACAAGTTGAGAGGAGTAGGACAGACCCAAGCATGTTGGTCATTACTTACTCTTCAGAGCACAACCATCCATGGCCAACTCACAGAAATGCTCTTGCTGGTTCAACCCGATCTCAACCATCCAAGAATAATGCTACTCCAAAGAATTCAGAACCCAAAAATGGCACAACAAAATCAGAAGAAGAGCATCAGGAGAGTAACAGTGATAGCAATGTGTCCCCAGTTGTTGGTGGAAACTCAACTAACAGTGCATCTGTGAAGGAAGAGATTGAGATGGATGTTGGAGAATTAAATAATGGACCCCAATACAAGCCATCTAAGATGAAGTGCAACCAACTTGAGGACTTATTTGCAGAATTGGGAGAAATAGAAGCTGACTCAGTGAACCTTTTGTCTGCACAAGGTTTTGATGCAGTTGATGATCAACAAAGGGAATCCAAGTCTTTAGATCCATTCAATCTCTTTGAATGGTCTGGATATAACAGCACCAAGTACCACCTCATTTGA 1266 0.4297 MDNYQGDLTDIIRASGASYGSCSTGTSSFETVPFSMDHWQFSSAPINFSSVLEDPFGGNFGDPFSNMKDPFLHELIMPGSANTGRLEEAACFGGGSSDPCVLAQKIILEDDMRRPCKLSNMIQISPNSKLPISSQGDSTVMNALSRVDNKSSAVVSVSDKMINAKTSKDHSLVGNTGVQISSPRYPGLKGRKSQAKKSICIPAPAAAPNSRQSGEVVPSDMWTWRKYGQKPIKGSPYPRAYYRCSSSKGCPARKQVERSRTDPSMLVITYSSEHNHPWPTHRNALAGSTRSQPSKNNATPKNSEPKNGTTKSEEEHQESNSDSNVSPVVGGNSTNSASVKEEIEMDVGELNNGPQYKPSKMKCNQLEDLFAELGEIEADSVNLLSAQGFDAVDDQQRESKSLDPFNLFEWSGYNSTKYHLI* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01684 421 MobiDBLite consensus disorder prediction 321 335 - -
Rops2g01684 421 Pfam WRKY DNA -binding domain 220 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g01684 421 MobiDBLite consensus disorder prediction 244 263 - -
Rops2g01684 421 ProSiteProfiles WRKY domain profile. 213 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g01684 421 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 114 381 IPR044810 GO:0003700
Rops2g01684 421 FunFam probable WRKY transcription factor 14 191 272 - -
Rops2g01684 421 Gene3D WRKY domain 206 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g01684 421 MobiDBLite consensus disorder prediction 271 335 - -
Rops2g01684 421 SMART WRKY_cls 218 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops2g01684 421 SUPERFAMILY WRKY DNA-binding domain 216 279 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops2g01684 421 MobiDBLite consensus disorder prediction 271 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01684 Rops-Chr2 25489394 25493251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01684 1 384 WRKY Transcription Factor Family AT2G34830 43.165 2.18e-81 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops2g01684 WRKY 4.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01684 - - gmx:100776919 504.212