Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01677 ATGACCAATTGTCTCAAAAACCCATCTCTTAGATACTGCAATTCCTCTCCCATGATGGACCTTGATGAAATATTCAAGTTTACTATTGTTGCTAGCCATCTTTGCAATGAATCAAAGAACCCCAATTGTGTGGAGTCATTCCCAAAAGTTGATCTTAGAAACCGCCCAAATATTGCATCTCTTTATTTGTCATTTAGTTTCTTTTGGAAGTATTGCCCCTTGAGCATTCTGTCCATTGATTTGTCCAACAATTCAATGAAGGGTAATTTTCCAATTGATGTTCTCTATTGCACCCAAATTCACTCTCTTGATTTAAGTATCAATGAATTTTCTGGTGACATTCCAATTCAAAGTTTCTCTTCCTTGACCAACCTCACTTTTCTTAACCTCTCCTATAACTGTTTTTCAGAGAGTGAGTTGTCTGATTCACAATTCTTCAAAAGGTTCAATTCTTCTAGTTTTATTCATTCTGGTGCTCTCCCAGATCACAAAAGGTTTACAATAAAGGTTGTCATTCTATTGGTTGGCTTTCCCATCCTTGTCATTTTGATGGTGATTTACTTGGGATGGCTTTGTTTCCAAAGGCCTGATTTTCTACCAAGAAAAATTCAAAGAAGTAGGAGGTTTACACCAGCAATTCTAAAGGCAGCAACTGCTAATTTTTCAAATAAGAATTTGGTGGGGAAGAGGGATTTTGTTCACATCTACAAAGGGATCTTGAGAGATGGTACTAGAGTGAAAATTGAGATGTACTTGGATGAGATATCAAGGGATAACTATAGTAAATTTGTTGAAGAATGTAAGGTTCTGACTGAGTTACACCACAAGAACCTTGTTAGAGTTTTGGGGTGGTGTAGAGGCAGAAAATTCAGGGCTATTATTACAGAATGGACAAGAGAAGAAAATGTTGAAATGTGGCTATCAGGGTCAGCTCCACCATGGAATCATAGACTGAAAGTGTTGATTGGAGTCGTAGAATGCATGCGTTATCTGAGAGAGGAATGGCCTGAAGTTGACTATGACCTCAAGACAAGTAGTGTTTTATTGTCTGACAATTTGGAACCATTAATTTCAAGGTTCAAAGTTGGAGATCAACACAACAATCGAAGAAAGATATATAAGTTTGGAGTATTCCTGCTAGAGATGATACTAAGCAAGAGGGTTCAAGAGGAGTTTGATGGAGGTGATGCTGGATTTATTAGGTACATGAGAACCCTTCATCCTGCAGACTTGCAACAGATGATTGATGAGAGAATGGAAGTAACTGAAACAACTTTACATCAAGTTAAACAAGTTCTATCCCTGGGATTAATGTGCATAGACCAATCATATAATGAGCAGCCAAGCTTGGGCTTGATATTTAATACTATAGCAAGAGCCTACAAGGCTAGCCTTGTTTTGCCATCTGCAAATCACAGGATATTTCATGGAGATAGATTTAAGGGACACATGCATGTTCAATCTAGATAA 1470 0.3762 MTNCLKNPSLRYCNSSPMMDLDEIFKFTIVASHLCNESKNPNCVESFPKVDLRNRPNIASLYLSFSFFWKYCPLSILSIDLSNNSMKGNFPIDVLYCTQIHSLDLSINEFSGDIPIQSFSSLTNLTFLNLSYNCFSESELSDSQFFKRFNSSSFIHSGALPDHKRFTIKVVILLVGFPILVILMVIYLGWLCFQRPDFLPRKIQRSRRFTPAILKAATANFSNKNLVGKRDFVHIYKGILRDGTRVKIEMYLDEISRDNYSKFVEECKVLTELHHKNLVRVLGWCRGRKFRAIITEWTREENVEMWLSGSAPPWNHRLKVLIGVVECMRYLREEWPEVDYDLKTSSVLLSDNLEPLISRFKVGDQHNNRRKIYKFGVFLLEMILSKRVQEEFDGGDAGFIRYMRTLHPADLQQMIDERMEVTETTLHQVKQVLSLGLMCIDQSYNEQPSLGLIFNTIARAYKASLVLPSANHRIFHGDRFKGHMHVQSR* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01677 489 Gene3D Transferase(Phosphotransferase) domain 1 204 367 - -
Rops2g01677 489 Gene3D Ribonuclease Inhibitor 10 163 IPR032675 -
Rops2g01677 489 Pfam Protein tyrosine and serine/threonine kinase 224 366 IPR001245 GO:0004672|GO:0006468
Rops2g01677 489 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 51 148 - -
Rops2g01677 489 SUPERFAMILY Protein kinase-like (PK-like) 200 457 IPR011009 -
Rops2g01677 489 Gene3D Transferase(Phosphotransferase) domain 1 368 459 - -
Rops2g01677 489 SUPERFAMILY L domain-like 38 159 - -
Rops2g01677 489 ProSiteProfiles Protein kinase domain profile. 221 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01677 Rops-Chr2 25399664 25401250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01677 8 442 Receptor kinase-like Gene Family AT3G47580 25.421 9.56e-29 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g01677 PK_Tyr_Ser-Thr 7.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01677 - - gmx:100779045 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01677 2 25399664 25401250 Rops2g01677 2 25399664 25401250 ECH