Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01675 ATGGTGAAAATCTCGGTCAGTGGATACGATGATGGAGAAGGACCCAGCAATCGAAACCAGAAGCGACCAAGGGAAGAAGAAGAAGAAGAAAGGGAACAAGAAGATCAACAACCACAACAAGGGTTTAGAATTGGAGAGCCTCCAACTGGAACCCAAGAAGCAGAGATTCACAACGAAGGAACTGAAGGATCGAATGGTAACTCAGGACAGAGAAATGACAAGGAAAGGTCCCTCTCTGTCTTTGTTACCGACCCTGATGTCCTTGATTGCTGCATTTGTTATGAACCCTTGAGTGTTCCTGTTTTCCAGTGTGAGAATGGGCATATTGCTTGCTCAAACTGCTGCGCTAGAATCAGGAACAAGTGTCCCATGTGCTCAATGCCCATTGGCTATAATCGCTGCCGAGCTATTGAGAAGGTGCTGGAAGCTATGAAAATATCATGCCTGAACGCAAAATATGGTTGTAAAGAGATGTTTAGTTACAGTAAGAAAAGTGACCATGAGAAGGAATGCATCTACATACCATGTTCATGCCCACATACAGGTTGCAACTTTGTTGCTTCATCCAAGGAGTTATCCCTCCACTTCAGCCACAGACATGTGGGCTCTGGAACACAATTTACATATGATAAATTTATCACTGTCTTCTTAAATACTGACCAGAAAGCAATCGTTCTTCAAGAGAAAAATGATGCTAATCTGTTTATTGTTCACAATAACCTTGAGCTTCTGGGGAATATAGTTCATATCAGTTACATTGGCCCCAATTCAATGTCAGGGTTTCATTATGATGTCTTGGCTAGGTCTCAGGGAAGCACCCTAATATTGCAATCTTTTACCAAGATCATTCAAGGCATTGCTGGTGCTCCTTCAACAGGGTTCCTCTTGATTCCATCTGATTTTTTTGGTTCTGGACATCTCAAACTGGATATTCGCATAAAGTCACAACATTAA 954 0.4214 MVKISVSGYDDGEGPSNRNQKRPREEEEEEREQEDQQPQQGFRIGEPPTGTQEAEIHNEGTEGSNGNSGQRNDKERSLSVFVTDPDVLDCCICYEPLSVPVFQCENGHIACSNCCARIRNKCPMCSMPIGYNRCRAIEKVLEAMKISCLNAKYGCKEMFSYSKKSDHEKECIYIPCSCPHTGCNFVASSKELSLHFSHRHVGSGTQFTYDKFITVFLNTDQKAIVLQEKNDANLFIVHNNLELLGNIVHISYIGPNSMSGFHYDVLARSQGSTLILQSFTKIIQGIAGAPSTGFLLIPSDFFGSGHLKLDIRIKSQH* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01675 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 133 IPR013083 -
Rops2g01675 317 SUPERFAMILY RING/U-box 89 132 - -
Rops2g01675 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 196 IPR013083 -
Rops2g01675 317 MobiDBLite consensus disorder prediction 1 74 - -
Rops2g01675 317 ProSiteProfiles Zinc finger RING-type profile. 90 126 IPR001841 -
Rops2g01675 317 Pfam Seven in absentia protein family 133 211 IPR018121 GO:0005737|GO:0006511|GO:0007275
Rops2g01675 317 CDD RING-HC_SIAHs 88 126 - -
Rops2g01675 317 ProSiteProfiles Zinc finger SIAH-type profile. 143 201 IPR013010 GO:0008270
Rops2g01675 317 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 29 315 IPR044286 -
Rops2g01675 317 MobiDBLite consensus disorder prediction 54 74 - -
Rops2g01675 317 SUPERFAMILY TRAF domain-like 145 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01675 Rops-Chr2 25388431 25391689 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01675 86 200 C3H Transcription Factor Family AT2G41980 35.897 5.17e-21 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01675 K04506 - gmx:100797881 448.743