Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01673 ATGCAGTGGTATTCATTTCACCAAGAACCTTCTTGTGGTGTTGATGTCCCCAATGGAAAAAAGGAAACGTTGCTTAAGATATTTGAGGGGTGTGTGACCTTGCTTGGTGATTCTATCCATGCTATGCAGCCAAATATGGGCCAAGGAGGATGCATGGCTATTGAGGACGCCTATCAACTTGCATGGGAGTTGGACAAAGCATGGCAACAAAGATACCACATCCTGGAAGAGTCAGTGGAAGGTTTTATTGATAAGATGATGCCTTTGATGTTGAGGTGGGTCTTAGGTGGCAATAATTCTGAACTTGAAGAGGGGGTGTGCTTCCAAGCCAGTCCACTCAACCTTTGCTGGGAGAAATTTGCAAGGTACTTTGAGGTGGAGTTGAAAGAAATTTGTAAGGTACTTCGAGGTGGAGTTGCAACCTATGTAATGGACCCTGAAAAGGCTATGGAATTGGTGGATGAGAACACCATTTGTGTTGCTGCTATCCTTGGTTCCGCACTAAATGGAGAGTTTGAAAAGCATTATCAAAGAGATGTTGTCCGTGGAGTAGAAGGTTATATTGTTACTGAATCCAAGCAAGTTGAAGTAGGAACAAAGTTATCAAAGGATAGCAGGAGGTATGGTGCAGAAAATGCATGTACCAGTGGTAGTACGTTATCAAGGGCTGCACTAAATTATGCACAGGCCCGTGCACAAATGGAGAAGGAGTGTGGGAACTTACTAAAAACTCTTGGCACCCAACATGCATTGGATCCATTGACCACAATGAAGGCTAGTGTCAACAACTTTGGGAAGGCAAGTGCTCTCATCCTGCGTGAGTGA 825 0.4424 MQWYSFHQEPSCGVDVPNGKKETLLKIFEGCVTLLGDSIHAMQPNMGQGGCMAIEDAYQLAWELDKAWQQRYHILEESVEGFIDKMMPLMLRWVLGGNNSELEEGVCFQASPLNLCWEKFARYFEVELKEICKVLRGGVATYVMDPEKAMELVDENTICVAAILGSALNGEFEKHYQRDVVRGVEGYIVTESKQVEVGTKLSKDSRRYGAENACTSGSTLSRAALNYAQARAQMEKECGNLLKTLGTQHALDPLTTMKASVNNFGKASALILRE* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01673 274 Gene3D - 95 182 IPR015421 GO:0003824
Rops2g01673 274 Gene3D - 15 94 IPR036188 -
Rops2g01673 274 Pfam Pyridoxal-dependent decarboxylase conserved domain 106 174 IPR002129 GO:0016830|GO:0019752|GO:0030170
Rops2g01673 274 SUPERFAMILY FAD/NAD(P)-binding domain 29 82 IPR036188 -
Rops2g01673 274 SUPERFAMILY PLP-dependent transferases 103 173 IPR015424 -
Rops2g01673 274 Pfam FAD binding domain 26 67 IPR002938 GO:0071949
Rops2g01673 274 PANTHER - 29 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01673 Rops-Chr2 25326322 25327390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01673 113 173 Calmodulin-binding Proteins AT1G65960 73.770 8.79e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01673 - - gmx:100783004 135.961