Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01642 ATGGAGGAGCCACTTTGGTTTCGCTTCTGGGTTCTGACGTTTACATTGCAATTCTTTATGGCCTTCTTAGCTCTAAGTGAAACCAACTTGACCACAGATAAGTTAGCACTTGTTGCTCTCAAATCTTGCATCACTCGGGACCCTTACCATTTTCTGTCTCATAACTGGTCTGCCTCCTCTTCTGTATGCAACTGGGTTGGTGTCACTTGTGATGCTCACCATGGCAGGGTGAGGACCTTGAATCTTGGTGACATGGGTCTTAGTGGCACCATACCCTCTCACTTAGGAAACCTCACCTTCCTTATTGAACTTCACCTTGGTGGGAACAGTTTCCATTATCAATTGCCACCAGAACTAGTCCACCTGCGTAGATTGAAGTCACTCAACTTGAGCTACAACCAATTCAGTGGAAATGTTCCAGCATGGATCGGAGGCTTATCTGTACTCAGATACTTGAACCTTGCAAACAATACGTTTAGTGGTTTCATTCCAAAATCATTATCCAATTTGACAATGCTAGAGATCTTGGATTGGAACCACAATCTCATTGAAGGAACCATTCCACCTAAAGTTGGCAAAATGACTCACTTGAGGGTTTTATCAATAGCTTCAAACACTCTTTCGGGGACCATTCCTCCAACGATTTCTAACCTCTCTTTCCTCGAGGGAATCAGTTTATCATATAACTCCTTGTCAGGAGGCATTCCGAGGGAAATTGGTGACCTTCCAAAGCTAAGAATAATGTATCTTGGGAATAATCCACTTTCTGGCTCCATACCATCAACAATCTTCAATCACTCAATGCTGCAAGATATTGAACTTGGCTCCAGTAATTTATCTGGCATTCTTCCACCAAACATATGCCTTGGACTTCCACAAATCCAAGTATTTTATCTAAGTTTCAATCAGTTCTCTGGTAAAATGCCATATGTTTGGCATCAATGCAAAGAGTTGACAGATGTAGACTTGTCAAAAAATAATTTCAGCAGAGGAAGCATTCCACATGATATTGGAAACCTAACTACGCTTGCCTCCTTATATCTTGATGAGTGCAACTTGGAAGGAGAAATTCCATCCTTTCTTTTTAATATATCTTCAATGAGAGCACTCAGTCTTGAAGGAAACAAGTTGAATGGTAGCCTAACAGAAGAGATGTTTGATCAGCTTCAATTACTTGAATTCTTGTATTTGGATCACAACCAATTTGTGGGAAGCATTCCAAGATCTATTAGCAATTGCACGATGCTCCAAGAATTATATCTGGGTGACAACTCTTTTACAGGTTCCATACCAGAGGAGATTGGTGATCTTCCTATGCTTGCACAATTAGCTATGGGAAGTAACCATTTAACTGGACCTATTCCTTCAAATATCTTTAACATATCATCACTAAGTTACTTGTTTCTGGCAAATAATTCCCTCTCAGGATTTCTTCCATCACATATCAGCCTAGAAAACCTAGTGGAACTGAACTTGAACACAAACCAACTTGGTGGAAACATTCCAAGCAGCATATCCAATGCTTCTAAGCTTAACTACATGGATTTGAGTGTGAATAAGTTCAATGGAGTTATACCCAATGCTTTTGGGGATTTGAGATACCTTCAGGGGCTTGGAGTTGCATACAATAATTTAACTACAATTGCTTCCGCAATAGAATTAAGCTTCCTTAGCTCTTTGAATTTTCTTCAAATAACAGGGAATCCAATGCGTGGACACCTTTCTAAATCAATCGGAAATATGTCCAACTTGGAACAGTTCTTTGCTGATGCTTGCAGTATCGATGGTAAAATTCCGTTAGAAATTGGAAATTTAAGCAATTTGTTTATACTAAGTTTGTATCAGAATGATTTAAGTGGACCAATTCCAACAACAATCAAAGGTTTGCAGTCTCTTCAATATTTGAATCTTGGAAACAACCAATTGCAGGGAACTATCATTGATGAACTTTGTGAAATTCACCGACTGAGTCAGTTGTATATAACAGAAAATAGGCTGATATCTGGAATGATCCCAACATGCTTTGGAAATCTTACTTCTCTAAGAAAGTTGTACTTGAACTCCAACAAATTGAATCAGGTGTCATCTTCTCTTTGGAGTCTCAAAGACATTCTGGAGGTAAACTTATCCGACAATGCTTTAACTGGATCTCTTCCACTTGGTATCGGAAATTTAAAAGCTGTTATATTGTTGGATCTATCAAAGAATCAGATTTCAGGAAACATTCCTAAGGCCATTGCTGGATTGCAAAATTTGCAAACACTCAACTTAGCACTTAATAAATTGCTAGGGAATATTCCTGATTCATTTGGCAGTTTGATAAGTTTGACATCCTTGGACTTATCCCAAAACTCTTTGTTTGGTGTGATTCCAAAATCTTTGGAGTCACTTCAGTATCTTAATTTTATCAATCTTTCTTATAATAGTTTAGAAGGTGAGATTCCCAATGGTGGACCTTTTAAAAATTTCTCAGCTCAGTCTTTCAGGTTTAATAAAGCACTTTGTGGAGATGCTCGACTACAAGTGCCACCATGCAGTAAAATGAAGAGGAAAAGGTCAAATGCAATTATGTTTTTCATCAAATGCATATTGCCTGTAATGTTGTCAACAATTTTGGTTGTTTTATGTGTACTCCTTCTAAGAAGGCGTCAAAGAAAGAATGATGGTGAATCTATTAAAGCAAGTTTATCAACATTACCAGCAACAAGAATGATTTCCTACTATGAAATTTCTCAGGCAACCAATGGATTTGATGAGAGTAATTTACTTGGTAAGGGCAGTTTTGGATCAGTGTTCAAAGGTATACTTCCAAATGGGATGATTGTTGCAGTCAAATTATTTAATTTGGACTTAGAATTAGGACCAAAGAGCTTTCTTGTAGAATGTGAAGCAATGCGCAATCTGCGTCATCGAAATCTCATCAAGATAATCGGTTGTTGTTCCAGTGATGATTACAAGCTTTTAGTAATGGAGTTCATGCCCAATGGGAGCCTTGAAAGTCGGTTGTATTCTCATAACTATTGTTTGGACTTCATGCAAAGGCTAAATATAATGATAGATGTAGCATCTGCATTGGATTATATGCATCATGGTTCTTCACCAACCGTGATTCATTGTGATGTAAAGCCTAGTAATGTTTTATTGGATGAAGACATGGTTGCTCATGTCAGTGACTTTGGCATTGCCAAACTTTTAGATGAAGGACAATCTAAAGAATATACCAAGACCATGGCTACACTTGGCTACATTGCACCAGAGTATGGATCCAAGGGGACTATCTCTACAAAAGGAGATGTATACAGTTTTGGGATTATGTTGATTGAAACATTCACAAGAAAGAAACCAACAGATGAGTTGTTTGTTGATGGATTGAGCATGAAAGGTTGGATTAGTGAATCATTACCCCATGCAATGACTCGAGTTGTGGATTCCAATTTGTTACAAGATGAAGGACTTCGTGCTGATGATATAGTATCATCTATTTTTAGGTTGGCCTTGAATTGTTGTGCAGATTTACCTGAAGAACGAATGAATATGACAGATGTAGCTGTATCATTAAACAAAATCAAGGTTGTGTTTCTGAAAGCTAATGACAAGTACATGTAA 3606 0.3794 MEEPLWFRFWVLTFTLQFFMAFLALSETNLTTDKLALVALKSCITRDPYHFLSHNWSASSSVCNWVGVTCDAHHGRVRTLNLGDMGLSGTIPSHLGNLTFLIELHLGGNSFHYQLPPELVHLRRLKSLNLSYNQFSGNVPAWIGGLSVLRYLNLANNTFSGFIPKSLSNLTMLEILDWNHNLIEGTIPPKVGKMTHLRVLSIASNTLSGTIPPTISNLSFLEGISLSYNSLSGGIPREIGDLPKLRIMYLGNNPLSGSIPSTIFNHSMLQDIELGSSNLSGILPPNICLGLPQIQVFYLSFNQFSGKMPYVWHQCKELTDVDLSKNNFSRGSIPHDIGNLTTLASLYLDECNLEGEIPSFLFNISSMRALSLEGNKLNGSLTEEMFDQLQLLEFLYLDHNQFVGSIPRSISNCTMLQELYLGDNSFTGSIPEEIGDLPMLAQLAMGSNHLTGPIPSNIFNISSLSYLFLANNSLSGFLPSHISLENLVELNLNTNQLGGNIPSSISNASKLNYMDLSVNKFNGVIPNAFGDLRYLQGLGVAYNNLTTIASAIELSFLSSLNFLQITGNPMRGHLSKSIGNMSNLEQFFADACSIDGKIPLEIGNLSNLFILSLYQNDLSGPIPTTIKGLQSLQYLNLGNNQLQGTIIDELCEIHRLSQLYITENRLISGMIPTCFGNLTSLRKLYLNSNKLNQVSSSLWSLKDILEVNLSDNALTGSLPLGIGNLKAVILLDLSKNQISGNIPKAIAGLQNLQTLNLALNKLLGNIPDSFGSLISLTSLDLSQNSLFGVIPKSLESLQYLNFINLSYNSLEGEIPNGGPFKNFSAQSFRFNKALCGDARLQVPPCSKMKRKRSNAIMFFIKCILPVMLSTILVVLCVLLLRRRQRKNDGESIKASLSTLPATRMISYYEISQATNGFDESNLLGKGSFGSVFKGILPNGMIVAVKLFNLDLELGPKSFLVECEAMRNLRHRNLIKIIGCCSSDDYKLLVMEFMPNGSLESRLYSHNYCLDFMQRLNIMIDVASALDYMHHGSSPTVIHCDVKPSNVLLDEDMVAHVSDFGIAKLLDEGQSKEYTKTMATLGYIAPEYGSKGTISTKGDVYSFGIMLIETFTRKKPTDELFVDGLSMKGWISESLPHAMTRVVDSNLLQDEGLRADDIVSSIFRLALNCCADLPEERMNMTDVAVSLNKIKVVFLKANDKYM* 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01642 1201 Pfam Protein kinase domain 918 1182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01642 1201 SUPERFAMILY L domain-like 322 482 - -
Rops2g01642 1201 Gene3D Transferase(Phosphotransferase) domain 1 993 1198 - -
Rops2g01642 1201 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 558 849 - -
Rops2g01642 1201 SMART LRR_typ_2 629 654 IPR003591 -
Rops2g01642 1201 SMART LRR_typ_2 291 314 IPR003591 -
Rops2g01642 1201 SMART LRR_typ_2 146 169 IPR003591 -
Rops2g01642 1201 SMART LRR_typ_2 749 772 IPR003591 -
Rops2g01642 1201 SMART LRR_typ_2 678 701 IPR003591 -
Rops2g01642 1201 SMART LRR_typ_2 364 388 IPR003591 -
Rops2g01642 1201 SMART LRR_typ_2 389 413 IPR003591 -
Rops2g01642 1201 SMART LRR_typ_2 437 461 IPR003591 -
Rops2g01642 1201 SMART LRR_typ_2 194 218 IPR003591 -
Rops2g01642 1201 SMART LRR_typ_2 242 266 IPR003591 -
Rops2g01642 1201 SMART LRR_typ_2 98 122 IPR003591 -
Rops2g01642 1201 SMART LRR_typ_2 532 555 IPR003591 -
Rops2g01642 1201 SMART LRR_typ_2 773 796 IPR003591 -
Rops2g01642 1201 SMART LRR_typ_2 484 508 IPR003591 -
Rops2g01642 1201 Pfam Leucine rich repeat 342 402 IPR001611 GO:0005515
Rops2g01642 1201 Pfam Leucine rich repeat 486 545 IPR001611 GO:0005515
Rops2g01642 1201 Pfam Leucine rich repeat 751 810 IPR001611 GO:0005515
Rops2g01642 1201 Pfam Leucine rich repeat 196 255 IPR001611 GO:0005515
Rops2g01642 1201 Pfam Leucine rich repeat 655 714 IPR001611 GO:0005515
Rops2g01642 1201 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1036 1048 IPR008271 GO:0004672|GO:0006468
Rops2g01642 1201 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Rops2g01642 1201 SUPERFAMILY L domain-like 44 379 - -
Rops2g01642 1201 ProSitePatterns Protein kinases ATP-binding region signature. 923 945 IPR017441 GO:0005524
Rops2g01642 1201 SUPERFAMILY RNI-like 483 816 - -
Rops2g01642 1201 SUPERFAMILY Protein kinase-like (PK-like) 895 1186 IPR011009 -
Rops2g01642 1201 Gene3D Ribonuclease Inhibitor 30 190 IPR032675 -
Rops2g01642 1201 Gene3D Ribonuclease Inhibitor 267 329 IPR032675 -
Rops2g01642 1201 Gene3D Ribonuclease Inhibitor 193 266 IPR032675 -
Rops2g01642 1201 FunFam Serine-threonine protein kinase plant-type 897 992 - -
Rops2g01642 1201 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 447 1183 - -
Rops2g01642 1201 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 313 557 - -
Rops2g01642 1201 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 72 312 - -
Rops2g01642 1201 CDD STKc_IRAK 923 1189 - -
Rops2g01642 1201 Pfam Leucine Rich Repeat 149 170 IPR001611 GO:0005515
Rops2g01642 1201 Gene3D Phosphorylase Kinase; domain 1 879 992 - -
Rops2g01642 1201 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 993 1199 - -
Rops2g01642 1201 ProSiteProfiles Protein kinase domain profile. 917 1194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01642 1201 Gene3D Ribonuclease Inhibitor 550 854 IPR032675 -
Rops2g01642 1201 Gene3D Ribonuclease Inhibitor 330 549 IPR032675 -
Rops2g01642 1201 SMART LRR_sd22_2 773 799 - -
Rops2g01642 1201 SMART LRR_sd22_2 678 700 - -
Rops2g01642 1201 SMART LRR_sd22_2 194 220 - -
Rops2g01642 1201 SMART LRR_sd22_2 484 510 - -
Rops2g01642 1201 SMART LRR_sd22_2 725 751 - -
Rops2g01642 1201 SMART LRR_sd22_2 605 631 - -
Rops2g01642 1201 SMART serkin_6 917 1193 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01642 Rops-Chr2 24785377 24792566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01642 12 1190 Receptor kinase-like Gene Family AT5G46330 33.499 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops2g01642 Pkinase 9.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01642 - K13420 gmx:100784397 1805.03