Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01640 ATGCCCACTATGGGAGTGGCAAGCAAGTTTCACATTTCCTTTTATTTAGTGGAGCACAATAAGTTTGCACTTGTTGCTCTCAAATCTTGCATCACTCAGGACCCTTACCATTTCCTGTCTCAAAATTGGTCTGCATCCTCTTCTGTATACAACTGGGTTGGTGTCACTTGTGATGCTCACCATGGCAGGGTGAGGACCTTGAATCTTGGTGACATGGATCTTAGTGGCACCATACCCTCTTATGTGGGAAACCTCACCTTCCTCATTGAGCTTCACCTTGGTGGAAACAGTTTCCATGATCAATTGCCACCACAACTAGTCCACATGCGTAGATTGAAGTCACTCAACTTGAGCTACAACCAATTCAGTGGAAATGTTCCAGCATGGATTGGAGCCTTATCTGCACTCAGATACTTGAACCTTGCAAACAATACATTTGGTGGTTTCATTCCAAAATCATCATCCAATTTGACAATGTTAGAGATCTTGGATTGGAACTACAATCTCATTGAAGGGACCATTCCACCTGAAGTTGGCAAAATGACCCATTTGAGAGTTTTATCAATCGCTTCAAACACCCTTTCGGGGACCATTCCTCCAACAATTTCTAACCTCTCTTTCCTCGAGGGAATCAGTTTATCTTATAACTCTTTGTCAGGAGGCATTCCGAGGGAAATTGGTGAGCTTCCACAGCTAAGAATAATGTATCTTGGGAATAATCCTCTTACCGGCTCCATACCATCAACAATCTTCAATCACTCAATGCTGCAAGATATTGAACTTGGCTCCAGTTCTATACCCGAGGAGATTGGTGATCTTCCTATACTTTCAAATTTAACTATGGGGATTAACCATTTAACTGGATCTATTCCCTCAAATATCTTTAACATGTCATCACTGAGTTACTTGTTTCTGGCATATAATTCCCTCTCAGGATTTCTTCCATCACATATCGGCCTAGAAAACTTGGAAGAACTACACTTATTTGAAAACCAACTTGGTGGAAACATTCCAAGCAGCATCTCCAATGCTTCTAAGCTTAACTACATAGATTTGAGTGAGAATAAGTTCAATGGTGTAATACCCAATGCTCTTGGGAATTTGAGATACCTTAAGCGGCTTGGTGTAGGAAACAATAATTTAACTGCTGATGCTTCCACTATTCAATTAAGCTTCCTTGGTTCTTTGAAATTTCTTGATATATCAGGGAATCCAATGCATGGACACCTTTCTAAATCAATTGGAAATATGTCCAAACTGGAACAGTTCTTTGCCGCTGTCTGCAATATTGATGGTATAATTCCCTTGGAAATTGGAAATTTAAGCAACTTGCTTGCACTAAGTTTGTATCAGAATGATTTAAGTGGACCAATTCCGACAACAATCAACGGTTTGCAGTCTCTTCAATATTTGAATCTTGGAAACAACCAATTACAGGGAACCATCATTGATGAACTTTGTGCAATCAACCGGCTAAGTGAGTTGTATATAACTGAAAATAAGCTAATTTCTGGAATGATCCCAACATGCTTTGGAAATCAATCTTCTCTGAGAAAGCTTTACTTGAACTCCAACAAATTGAATCAGGTGTCATCTTCTCTTTGGAGTCTCAGACATTCTGGAGCAACAAGAATGACTTCCTACAATGAACTTTCTCAGGCAACCAATGGATTTGATGAGAGTAATTTACTTGGTAAGGGCAGTTTTGGCTCCGTGTTCAAAGGTATACTTCCAAATGGGATGATTGTAGCAGTTAAATTATTTAATTTGGACTTAGATTTAGGATCAAAGAGCTTTGATGTAGAATGTGAAGCAATGCGCAATCTGCGTCATCGAAATCTAATCAAGATCATCGGTAGTTGTTCCAATCTTGATTACAAGCTTTTAGTAATGAAGTTCATGCCCAATAGGAGCCTTGAAAGTGGGTTGTATTCTCATAACTATTGTTTGGATTTCATGCAAAGGCTAAATATAATGATAGGTGTGGCATCTGCATTGGATTATATGCATCATGGTTCTTCACCAATTGTGGTTCACTGTGATGTAAAGCCTAGTAATGTCTTATTGGATGAAGACATGGTTGCCCATGTGAGCGACTTTGGCATTGCCAAACTTCTAGATGGACAATCCAAAGAATATACCAAGACCATGGCTACACTTGGCTACATGGCACCAGAGTATGGATCCAAGGGGATTATCTCTACAAAAGGAGATGTATACAGTTTTGGGATTATGTTGATGGAAACATTCACAAGAAAGAAGCCAACAGATGAATTGTTTGTTGATGGATTGAGCATGAAAGGTTGGATTAGTGAATCATTACCTCATGCAATCACTCGAGTTGTAGATTCCAATTTGTTGCAAGATGAAGGACATCATATTGATGACATCACAAAATCTATATCATCTATTTTTAGATTGGCCTTGAGTTGTTGTGCAGATTTACCTGAAGAAAGAATGAATATGACAGATGTTGCTGCATCATTGAACAAAATCAAGTTCATGTTTCCTAAAACTGATGACAACCACATTCAACGACAAGCATATTCAACCTAA 2556 0.3893 MPTMGVASKFHISFYLVEHNKFALVALKSCITQDPYHFLSQNWSASSSVYNWVGVTCDAHHGRVRTLNLGDMDLSGTIPSYVGNLTFLIELHLGGNSFHDQLPPQLVHMRRLKSLNLSYNQFSGNVPAWIGALSALRYLNLANNTFGGFIPKSSSNLTMLEILDWNYNLIEGTIPPEVGKMTHLRVLSIASNTLSGTIPPTISNLSFLEGISLSYNSLSGGIPREIGELPQLRIMYLGNNPLTGSIPSTIFNHSMLQDIELGSSSIPEEIGDLPILSNLTMGINHLTGSIPSNIFNMSSLSYLFLAYNSLSGFLPSHIGLENLEELHLFENQLGGNIPSSISNASKLNYIDLSENKFNGVIPNALGNLRYLKRLGVGNNNLTADASTIQLSFLGSLKFLDISGNPMHGHLSKSIGNMSKLEQFFAAVCNIDGIIPLEIGNLSNLLALSLYQNDLSGPIPTTINGLQSLQYLNLGNNQLQGTIIDELCAINRLSELYITENKLISGMIPTCFGNQSSLRKLYLNSNKLNQVSSSLWSLRHSGATRMTSYNELSQATNGFDESNLLGKGSFGSVFKGILPNGMIVAVKLFNLDLDLGSKSFDVECEAMRNLRHRNLIKIIGSCSNLDYKLLVMKFMPNRSLESGLYSHNYCLDFMQRLNIMIGVASALDYMHHGSSPIVVHCDVKPSNVLLDEDMVAHVSDFGIAKLLDGQSKEYTKTMATLGYMAPEYGSKGIISTKGDVYSFGIMLMETFTRKKPTDELFVDGLSMKGWISESLPHAITRVVDSNLLQDEGHHIDDITKSISSIFRLALSCCADLPEERMNMTDVAASLNKIKFMFPKTDDNHIQRQAYST* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01640 851 Pfam Protein kinase domain 559 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01640 851 FunFam Serine-threonine protein kinase plant-type 538 633 - -
Rops2g01640 851 SUPERFAMILY RNI-like 67 382 - -
Rops2g01640 851 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 634 842 - -
Rops2g01640 851 PANTHER OS04G0122200 PROTEIN 543 833 - -
Rops2g01640 851 ProSiteProfiles Protein kinase domain profile. 558 835 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01640 851 Pfam Leucine Rich repeat 109 124 IPR001611 GO:0005515
Rops2g01640 851 FunFam Leucine-rich repeat receptor protein kinase EMS1 388 485 - -
Rops2g01640 851 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 176 266 - -
Rops2g01640 851 Gene3D Transferase(Phosphotransferase) domain 1 634 848 - -
Rops2g01640 851 Gene3D Ribonuclease Inhibitor 262 385 IPR032675 -
Rops2g01640 851 SUPERFAMILY L domain-like 314 540 - -
Rops2g01640 851 Gene3D Phosphorylase Kinase; domain 1 543 633 - -
Rops2g01640 851 FunFam Leucine-rich repeat receptor-like protein kinase 17 175 - -
Rops2g01640 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 677 689 IPR008271 GO:0004672|GO:0006468
Rops2g01640 851 Gene3D Ribonuclease Inhibitor 174 261 IPR032675 -
Rops2g01640 851 Gene3D Ribonuclease Inhibitor 17 173 IPR032675 -
Rops2g01640 851 SUPERFAMILY Protein kinase-like (PK-like) 531 829 IPR011009 -
Rops2g01640 851 Pfam Leucine rich repeat 183 242 IPR001611 GO:0005515
Rops2g01640 851 ProSitePatterns Protein kinases ATP-binding region signature. 564 586 IPR017441 GO:0005524
Rops2g01640 851 Pfam Leucine Rich Repeat 136 157 IPR001611 GO:0005515
Rops2g01640 851 Gene3D Ribonuclease Inhibitor 464 542 IPR032675 -
Rops2g01640 851 SMART serkin_6 558 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01640 851 SMART LRR_typ_2 273 297 IPR003591 -
Rops2g01640 851 SMART LRR_typ_2 133 157 IPR003591 -
Rops2g01640 851 SMART LRR_typ_2 320 344 IPR003591 -
Rops2g01640 851 SMART LRR_typ_2 85 109 IPR003591 -
Rops2g01640 851 SMART LRR_typ_2 515 537 IPR003591 -
Rops2g01640 851 SMART LRR_typ_2 181 205 IPR003591 -
Rops2g01640 851 SMART LRR_typ_2 465 490 IPR003591 -
Rops2g01640 851 SMART LRR_typ_2 229 253 IPR003591 -
Rops2g01640 851 FunFam Leucine-rich repeat receptor protein kinase EMS1 294 387 - -
Rops2g01640 851 Gene3D Ribonuclease Inhibitor 386 463 IPR032675 -
Rops2g01640 851 Pfam Leucine rich repeat N-terminal domain 22 58 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01640 Rops-Chr2 24770624 24774574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01640 18 839 Receptor kinase-like Gene Family AT3G47570 32.928 2.38e-144 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops2g01640 Pkinase 7.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01640 - K13420 gmx:100784397 676.781