Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01638 ATGATGGAATTAGGGTCTATTCCAAGAGTGGATGGCCTATTAGCAATGACACGAGCATTTGGAGATGGAATATTGAAGGAGCACATTACTGCTGAACCAGATGTGGTGATTCAGAAGATTGATGAGGACACTGAATTCATCATTCTGGCAAGTGATGGTCTGTGGAAGGTGATGACAAATCAGGAGGCTTGTGATTGTATCAGGGATGTTGATGATGCTCAAAAGGCATCTAAAAAGCTAGTTAAAGAAGCCAAATCTCTGGGAAGCTATGATGATATTTCGTGCATAGTTGTTATGTTCTAG 303 0.4092 MMELGSIPRVDGLLAMTRAFGDGILKEHITAEPDVVIQKIDEDTEFIILASDGLWKVMTNQEACDCIRDVDDAQKASKKLVKEAKSLGSYDDISCIVVMF* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01638 100 ProSiteProfiles PPM-type phosphatase domain profile. 1 100 IPR001932 -
Rops2g01638 100 SUPERFAMILY PP2C-like 6 100 IPR036457 -
Rops2g01638 100 CDD PP2Cc 6 98 IPR001932 -
Rops2g01638 100 PANTHER PROTEIN PHOSPHATASE 9 99 IPR015655 GO:0004722|GO:0006470
Rops2g01638 100 Pfam Protein phosphatase 2C 7 92 IPR001932 -
Rops2g01638 100 Gene3D - 2 100 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01638 Rops-Chr2 24743497 24744815 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01638 5 100 PP2C-type Phosphatase Gene Family AT4G28400 58.333 4.32e-36 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01638 - - gmx:100814772 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01638 2 24743497 24744815 Rops2g01638 2 24743497 24744815 ECH