Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops2g01626 | ATGGAAAAGGAGCCTTTGCTCCCATATTTTAGCCCCAGAAAGAGGCCTCCACCATTGCCACCCCAACTTTTTCCATTGCCTGAGAATGATGAAATCATTCTTCCAATGACCCCTTCGGAATTCAAGGATCGTCTCATCTTTGGTCCTTCCCCTTCACCAGGGGACCCTTCACCTTTAGCTGAGGCCTTAACACTTTCACGTAATTCCCCAAAATCTTCATCTTCTTCTTCACATGACTTTGCATCAGCACTCTTTGATGCACCACAACAGTCCCAACAACAACACTCCTCTTGGCTCATTGACCCCAATTATTCATGTCGCAAAACCAACCTCCATCGCTCCAAAACTGCACCAGCTATAGCCGTGATCAGCGATTTCAATCCCCAACCTGCTGTGAAAAGACCCCAATTTGGTAGCCAATCAATTGTTCGTCAGGCTGTGATCCTTCTTGTTCTGTATTTGGCATTAGGGGTGGTGATTTATTGGTTCAATCGTAATAATTTTTCAGCAACTGAAACTCATCCTATAGTGGATGCATTATATTTTTGTATAGTGACAATGTGCACCATAGGCTATGGTGACATTACTCCAAATAGTACAGCAACAAAGCTTTTCTCTGTATTGTTTGTGTTGGTGGGGTTTGGTTTTATTGACATATTGCTTAGTGGGATGGTTAGCTATGTTCTTGATTTGCAGGAGAATCATTTGTTGAGGGCAGTTAAGGGTAGGGGTGAGAAGGATGGGAAGTCATATATAATTGATGTGAAGAAAGGGAGGATGAGGATTAGGATGAAGGTGGCATTGGCATTGGGGGTTGTGGTACTTTGTATTGGAGTTGGTGTGGGGGTTATGCATTTTGTGGAAAGGCTTGGATGGGTAGATTCCTTTTATCTTTCAGTTATGTCTGTTACAACTGTTGGCTATGGAGACCATGCATTCAAGACCTTGCATGGTCGTATCTTTGCTGCAATTTGGTTGCTTGTGTCAACACTTGCAGTGGCCCGAGCATTCCTCTATTTGGCTGAGGCAAGAGTTGATAAGCGGCATAGGAGGATGGCAAAGTGGGTCCTCGGTCAGGATATGACTGTTTCTGAGTTTCTTGCTGCAGACATAGACAATAATGGATTTGTGAGTAAATCAGAATATGTTATATACAAGCTCAAGGAGATGGGAAAAGTAACTGAGAAGGACATCATGCAGATTAGTGAGAAGTTTGATAGACTAGATGCTGGCAACTGTGGAAAAATAACACTTGCTGATCTCATGGAGGGTCATAATTGA | 1281 | 0.4309 | MEKEPLLPYFSPRKRPPPLPPQLFPLPENDEIILPMTPSEFKDRLIFGPSPSPGDPSPLAEALTLSRNSPKSSSSSSHDFASALFDAPQQSQQQHSSWLIDPNYSCRKTNLHRSKTAPAIAVISDFNPQPAVKRPQFGSQSIVRQAVILLVLYLALGVVIYWFNRNNFSATETHPIVDALYFCIVTMCTIGYGDITPNSTATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQENHLLRAVKGRGEKDGKSYIIDVKKGRMRIRMKVALALGVVVLCIGVGVGVMHFVERLGWVDSFYLSVMSVTTVGYGDHAFKTLHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWVLGQDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKVTEKDIMQISEKFDRLDAGNCGKITLADLMEGHN* | 427 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops2g01626 | 426 | Gene3D | - | 140 | 240 | - | - | |
Rops2g01626 | 426 | MobiDBLite | consensus disorder prediction | 43 | 80 | - | - | |
Rops2g01626 | 426 | SUPERFAMILY | Voltage-gated potassium channels | 256 | 362 | - | - | |
Rops2g01626 | 426 | FunFam | Two-pore potassium channel 5 | 131 | 241 | - | - | |
Rops2g01626 | 426 | ProSitePatterns | EF-hand calcium-binding domain. | 370 | 382 | IPR018247 | - | |
Rops2g01626 | 426 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Rops2g01626 | 426 | FunFam | Two-pore potassium channel 3 | 249 | 363 | - | - | |
Rops2g01626 | 426 | Gene3D | - | 334 | 426 | - | - | |
Rops2g01626 | 426 | PRINTS | Two pore domain K+ channel signature | 185 | 213 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Rops2g01626 | 426 | PRINTS | Two pore domain K+ channel signature | 304 | 313 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Rops2g01626 | 426 | MobiDBLite | consensus disorder prediction | 62 | 80 | - | - | |
Rops2g01626 | 426 | SUPERFAMILY | EF-hand | 360 | 422 | IPR011992 | - | |
Rops2g01626 | 426 | Pfam | Ion channel | 272 | 341 | IPR013099 | - | |
Rops2g01626 | 426 | Pfam | Ion channel | 148 | 228 | IPR013099 | - | |
Rops2g01626 | 426 | Gene3D | - | 271 | 333 | - | - | |
Rops2g01626 | 426 | PANTHER | POTASSIUM CHANNEL, SUBFAMILY K | 147 | 400 | IPR003280 | GO:0005267|GO:0016020|GO:0071805 | |
Rops2g01626 | 426 | MobiDBLite | consensus disorder prediction | 10 | 25 | - | - | |
Rops2g01626 | 426 | SUPERFAMILY | Voltage-gated potassium channels | 141 | 228 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops2g01626 | Rops-Chr2 | 24545324 | 24555402 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops2g01626 | 4 | 424 | Ion Channels | AT4G18160 | 64.501 | 0.0 | 524 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops2g01626 | K05389 | - | gmx:100787238 | 672.159 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops2g01626 | 2 | 24545324 | 24555402 | Rops2g01626 | 2 | 24545324 | 24555402 | ECH |