Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01626 ATGGAAAAGGAGCCTTTGCTCCCATATTTTAGCCCCAGAAAGAGGCCTCCACCATTGCCACCCCAACTTTTTCCATTGCCTGAGAATGATGAAATCATTCTTCCAATGACCCCTTCGGAATTCAAGGATCGTCTCATCTTTGGTCCTTCCCCTTCACCAGGGGACCCTTCACCTTTAGCTGAGGCCTTAACACTTTCACGTAATTCCCCAAAATCTTCATCTTCTTCTTCACATGACTTTGCATCAGCACTCTTTGATGCACCACAACAGTCCCAACAACAACACTCCTCTTGGCTCATTGACCCCAATTATTCATGTCGCAAAACCAACCTCCATCGCTCCAAAACTGCACCAGCTATAGCCGTGATCAGCGATTTCAATCCCCAACCTGCTGTGAAAAGACCCCAATTTGGTAGCCAATCAATTGTTCGTCAGGCTGTGATCCTTCTTGTTCTGTATTTGGCATTAGGGGTGGTGATTTATTGGTTCAATCGTAATAATTTTTCAGCAACTGAAACTCATCCTATAGTGGATGCATTATATTTTTGTATAGTGACAATGTGCACCATAGGCTATGGTGACATTACTCCAAATAGTACAGCAACAAAGCTTTTCTCTGTATTGTTTGTGTTGGTGGGGTTTGGTTTTATTGACATATTGCTTAGTGGGATGGTTAGCTATGTTCTTGATTTGCAGGAGAATCATTTGTTGAGGGCAGTTAAGGGTAGGGGTGAGAAGGATGGGAAGTCATATATAATTGATGTGAAGAAAGGGAGGATGAGGATTAGGATGAAGGTGGCATTGGCATTGGGGGTTGTGGTACTTTGTATTGGAGTTGGTGTGGGGGTTATGCATTTTGTGGAAAGGCTTGGATGGGTAGATTCCTTTTATCTTTCAGTTATGTCTGTTACAACTGTTGGCTATGGAGACCATGCATTCAAGACCTTGCATGGTCGTATCTTTGCTGCAATTTGGTTGCTTGTGTCAACACTTGCAGTGGCCCGAGCATTCCTCTATTTGGCTGAGGCAAGAGTTGATAAGCGGCATAGGAGGATGGCAAAGTGGGTCCTCGGTCAGGATATGACTGTTTCTGAGTTTCTTGCTGCAGACATAGACAATAATGGATTTGTGAGTAAATCAGAATATGTTATATACAAGCTCAAGGAGATGGGAAAAGTAACTGAGAAGGACATCATGCAGATTAGTGAGAAGTTTGATAGACTAGATGCTGGCAACTGTGGAAAAATAACACTTGCTGATCTCATGGAGGGTCATAATTGA 1281 0.4309 MEKEPLLPYFSPRKRPPPLPPQLFPLPENDEIILPMTPSEFKDRLIFGPSPSPGDPSPLAEALTLSRNSPKSSSSSSHDFASALFDAPQQSQQQHSSWLIDPNYSCRKTNLHRSKTAPAIAVISDFNPQPAVKRPQFGSQSIVRQAVILLVLYLALGVVIYWFNRNNFSATETHPIVDALYFCIVTMCTIGYGDITPNSTATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQENHLLRAVKGRGEKDGKSYIIDVKKGRMRIRMKVALALGVVVLCIGVGVGVMHFVERLGWVDSFYLSVMSVTTVGYGDHAFKTLHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWVLGQDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKVTEKDIMQISEKFDRLDAGNCGKITLADLMEGHN* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01626 426 Gene3D - 140 240 - -
Rops2g01626 426 MobiDBLite consensus disorder prediction 43 80 - -
Rops2g01626 426 SUPERFAMILY Voltage-gated potassium channels 256 362 - -
Rops2g01626 426 FunFam Two-pore potassium channel 5 131 241 - -
Rops2g01626 426 ProSitePatterns EF-hand calcium-binding domain. 370 382 IPR018247 -
Rops2g01626 426 MobiDBLite consensus disorder prediction 1 27 - -
Rops2g01626 426 FunFam Two-pore potassium channel 3 249 363 - -
Rops2g01626 426 Gene3D - 334 426 - -
Rops2g01626 426 PRINTS Two pore domain K+ channel signature 185 213 IPR003280 GO:0005267|GO:0016020|GO:0071805
Rops2g01626 426 PRINTS Two pore domain K+ channel signature 304 313 IPR003280 GO:0005267|GO:0016020|GO:0071805
Rops2g01626 426 MobiDBLite consensus disorder prediction 62 80 - -
Rops2g01626 426 SUPERFAMILY EF-hand 360 422 IPR011992 -
Rops2g01626 426 Pfam Ion channel 272 341 IPR013099 -
Rops2g01626 426 Pfam Ion channel 148 228 IPR013099 -
Rops2g01626 426 Gene3D - 271 333 - -
Rops2g01626 426 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 147 400 IPR003280 GO:0005267|GO:0016020|GO:0071805
Rops2g01626 426 MobiDBLite consensus disorder prediction 10 25 - -
Rops2g01626 426 SUPERFAMILY Voltage-gated potassium channels 141 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01626 Rops-Chr2 24545324 24555402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01626 4 424 Ion Channels AT4G18160 64.501 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01626 K05389 - gmx:100787238 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01626 2 24545324 24555402 Rops2g01626 2 24545324 24555402 ECH