Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01618 ATGGCTGCCTCTTCCATGGCTCTCTCTTCTCCTTCATTGGCTGGCAAGGCCGTGAATCTGTCCCCATCAGGCCCAGAATTGGGAAGTGGCAGGTTCACCATGAGGAGGGCTGCCACCACCACCAAGAAGGTCTCATCCGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGTCCATTCTCAGGTGAACCCCCAAGCTACTTGACTGGTGAGTTCCCTGGTGACTATGGTTGGGACACTGCTGGGCTTTCAGCTGACCCAGAAACTTTTGCCAAGAACCGTGAGCTTGAGGTCATTCACAGCAGATGGGCCATGTTGGGAGCCCTAGGTTGTGTCTTCCCTGAGCTCTTGGCCCGCAACGGTGTCAAGTTTGGTGAGGCTGTGTGGTTCAAGGCTGGTTCCCAGATTTTCAGTGAGGGTGGGCTTGACTACTTGGGTAACCCAAGCCTGATCCATGCACAGAGCATCCTTGCCATCTGGGCCTGCCAAGTTATCTTGATGGGTGCTGTTGAAGGTTACCGTATTGCTGGTGGCCCTCTTGGTGAGGTCACTGACCCACTTTACCCAGGTGGCAGCTTTGACCCATTGGGCCTTGCTGATGACCCAGAGGCTTTTGCTGAGCTTAAGGTGAAGGAGCTCAAGAATGGTAGGTTAGCCATGTTCTCCATGTTTGGGTTCTTTGTTCAGGCTATTGTGACTGGAAAGGGACCTTTGGAGAACCTTGCTGACCACCTTGCAGACCCAGTCAACAACAATGCTTGGGCCTATGCCACCAACTTTGTCCCTGGAAAGTGA 801 0.5381 MAASSMALSSPSLAGKAVNLSPSGPELGSGRFTMRRAATTTKKVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01618 266 Pfam Chlorophyll A-B binding protein 66 232 IPR022796 -
Rops2g01618 266 SUPERFAMILY Chlorophyll a-b binding protein 49 263 - -
Rops2g01618 266 Gene3D Chlorophyll a/b binding protein domain 57 259 - -
Rops2g01618 266 MobiDBLite consensus disorder prediction 1 17 - -
Rops2g01618 266 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 266 IPR001344 GO:0009765|GO:0016020
Rops2g01618 266 MobiDBLite consensus disorder prediction 1 30 - -
Rops2g01618 266 FunFam Chlorophyll a-b binding protein, chloroplastic 57 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01618 Rops-Chr2 24421190 24422224 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01618 1 266 Chloroplast and Mitochondria Gene Families AT2G34430 88.433 1.38e-171 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01618 K08912 - egr:104444821 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01618 2 24421190 24422224 Rops2g01618 2 24421190 24422224 ECH