Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01616 ATGTTATCTCTAAAGTTTAGTTTGACTGTGGTCATAATCCTTTCAATCGTAGCCACTGTTTCATATGCTGAAACAAGCTTAGATGTTGAAATTGAAGCTTTGAAAGCTTTCAAGAATTCCATTACCCTTGACCCAAATGGAACACTTGCAGATTGGGTTGACAGCCACCATCACTGCAACTGGTCTGGCATTGCATGTGATCCATTTTCAAATCATGTTATTTCAATTTCTCTGGTTGGTCTTCAGCTCCAAGGAGAGATTTCACCATTCCTTGGAAACATTTCAGGCCTTCAGGTTCTTGATTTAACTTCAAATTCATTTACTGGGTATATTCCTGCTCAGCTTAGTCTTTGCACTAAACTTACTCAGCTGATTCTTTTTGAAAATGCTCTCTCAGGACCAATCCCTCCTGCCTTAGGAAACCTGAAAAGCCTGCAGTATTTGGACTTAGGTAGTAACTACTTGAATGGAAGCCTCCCTGAAAGCATATTCAATTGCACTTCTTTGTTAGGTATTGCTTTCAATTTCAACAACCTTACTGGCACGATCCCATCAAACATAGGGAATCTAGTGAACCTTACACAGGTTGTAGGATTTGGGAATAACTTGGTTGGGTCTATACCTCTTTCCATTGGTCAGTTGGGAGCTTTGCAATCTCTTGATTTTAGTCAAAACCACTTATCAGGTGCAATACCTCGAGAGATTGGAAATCTGACAAATTTAGGATACCTTTTATTGTTTGAAAATTCCTTGACAGGGAAAATCCCTTCCGAGCTTGCTCAGTGTAACAAACTTCAAAACCTTGAGTTATATGAAAATAAGTTCATTGGAAGTATTCCTCCTGAGCTTGGAAATTTAGTTCAATTGGAGACATTAAGGTTATATGGCAATAACTTAAATTCCACCATTCCATCTTCCATATTTCTGTTGAAATCTTTAACACATTTAGGACTCTCACAGAATAACTTGGAGGGAACAATATCTTCTGAGATTGGATCTCTGAGTTCCTTACAAGTGCTAACCCTGCATTTAAATAAGTTTACTGGGCTGATCCCTTCATCAATAACAAACTTGACAAACCTGACATATCTGTCAATGAGCCAGAATCTCCTTTCAGGTGAACTTCCTTCAAACTTGGGTAAGCTTCATAATTTGAAGGTTCTTATCTTGAACAACAACTCTTTTCATGGAACCATTCCCCCTAGCATTACCAATTGTACTAGTTTGTTAAATGTAAGCTTGTCTTTTAATGCTTTAACTGGGAAAATTCCTGAGGGTTTTTCAAGGTTGCCTAATCTTACTTTCCTGTCTCTTGCATCCAACAAAATGACTGGGGAAATCCCAAATGACCTGTTCAACTGCTCAAATCTTAGTACTCTAAGTTTGGGGGTGAACAACTTCAGTGGATTGATAAAATCTGGTATCCAGAACCTGTTTAAACTCAAGCTTTTGCAGCTGAATTCAAATTATTTCATAGGACCAATTCCACCTGAGATTGGAAACTTGAGTCAAGTCATCACTTTGTCCCTTTCTGAAAATAGATTTTCAGGTCAAATTCCACCAGAACTGTCCAAACTTTCTCTCCTCCAGGGACTCTCTCTCCATGACAATGAATTAGAAGGTACAATACCTGATAAACTCTCTGAATTAAAACGACTAACTAAACTTATGTTGCATCAAAACAAGTTGGTTGGTCAAATACCAGATTCTATCTCAAAGCTTGAGATGCTTTCATACTTAGACCTCCATGGCAACAAACTTAATGGGTCCATTCCAAGAAGCATGGGGCAGCTTAATCATCTTTTAGTTTTGGATCTCTCTTACAACCACCTCACAGGATCAATTCCTGAAGAGGTCATTGCAGGCTTCAAAGACATGCAGATGTATCTTAACCTTTCTTACAACCACTTGGTTGGAAGTGTTCCAACTGAGCTGGGCATGTTGGAAATGACCCAAGCCATTGATATTTCAAACAATAATCTTTCAGGTTTCCTTCCCAAGACACTTGCTGGGTGCAGAAATCTGTTCAGTCTTGATTTTTCAGGAAACAATATTTCAGGTCCTATTCCTGCAGAAGCTTTTAGTCACATGGACTTGCTTCAAAGCTTAAACCTTTCAAGAAATCATTTAGAAGGTGAAATCCCTGAAATCTTGGCAGAGCTTAAGAATCTTAGTTCTCTAGATCTTTCTCGGAACAACTTGAAGGGAACCATTCCTGAGGGATTTGCCAGTCTCTCCTCCCTCATGCATCTCAACCTTTCTTTCAATCAACTTGAAGGTCCAGTACCTCTGACTGGAATATTTTCACATATTAATGCATCTAGTATGATGGGAAACCAGGATCTTTGTGGAGCGAAGTTCTTAGGGTCATGCAGAGAGAGTGGTCATTCACTATCCAAGAAGAGCATATCTATTATTTCTGCATTGGGATCTCTTGCTATTATACTTCTTTTAGTGTTTGTGGTTTTAATTCTCAGTCGAGGCACCAAATTCTGCAATTCTAAACAAAGTGATAACAGTGAGAATTATGAACCAGAGTACAGTTCAGCATTGGCTCTTAAAAGATTCAATCCAAATGAGTTAGAAAATGCCACTGGTTTTTTCAGGCCAGACAACATCATTGGTGCTAGCAGTTTGAGCACCGTTTACAAGGGTCAATTGGAAGATGGCCAGATTGTAGCCATAAAAAGATTGAATTTACACCAATTCTCTGCAAATACTGACAAGATCTTCAAGAGAGAAGCCAGCACCTTGAGCCAGCTGAGACATAGGAATTTGGTTAAGGTACTTGGATACGCTTGGGAGAGTGGGAAAATGAAGGCTTTAGTAATAGAGTACATGGAGAATGGGAATTTGGATAGCATTATACATGACAAAGGAGTGGATCAATCTAGATGGACTTTATCTGAAAGACTCCGAGTTTTCATTTCTATTGCTAGTGGATTGGATTACTTGCACTCTGGTTATGATTTTCCCATTGTACACTGTGATTTAAAGCCTTCTAACATCCTTTTAGATAGAGACTGGGAAGCTCATGTCAGTGATTTTGGGACAGCTCGAATACTTGGTCTTCATCTGCAGGATGGTAGTACCCTTTCTTCATCAGCAGCTTTGCAAGGCACAGTTGGCTATTTGGCACCAGAATTTGCCTATATGAGGCAAGTAACGACTAAAGCAGATGTGTTCAGCTTTGGTATCATTATAATGGAGTTTCTAACAAAAAGAAGGCCAACAGGGCTCTCAGAAGAGGATGGCTTGCCAAGCAGTTTGCGTGAAGTGGTGGCGAAAGCCCTTGCAAATGGAATGGAACAACTTGTCAATATTGTGGACCCTATGTTGACCTCGAATGACAAAGAAGACCATGTCCAAGTATTGGCAGGGTTATTTAAGCTATCCTTGGGCTGCACCTTCCCTGATCCTGAAGATCGACCTAATATGAATGAGGTGTTATCTACCCTTGTGAAGCTTAAAACAGCAAGATAG 3483 0.3956 MLSLKFSLTVVIILSIVATVSYAETSLDVEIEALKAFKNSITLDPNGTLADWVDSHHHCNWSGIACDPFSNHVISISLVGLQLQGEISPFLGNISGLQVLDLTSNSFTGYIPAQLSLCTKLTQLILFENALSGPIPPALGNLKSLQYLDLGSNYLNGSLPESIFNCTSLLGIAFNFNNLTGTIPSNIGNLVNLTQVVGFGNNLVGSIPLSIGQLGALQSLDFSQNHLSGAIPREIGNLTNLGYLLLFENSLTGKIPSELAQCNKLQNLELYENKFIGSIPPELGNLVQLETLRLYGNNLNSTIPSSIFLLKSLTHLGLSQNNLEGTISSEIGSLSSLQVLTLHLNKFTGLIPSSITNLTNLTYLSMSQNLLSGELPSNLGKLHNLKVLILNNNSFHGTIPPSITNCTSLLNVSLSFNALTGKIPEGFSRLPNLTFLSLASNKMTGEIPNDLFNCSNLSTLSLGVNNFSGLIKSGIQNLFKLKLLQLNSNYFIGPIPPEIGNLSQVITLSLSENRFSGQIPPELSKLSLLQGLSLHDNELEGTIPDKLSELKRLTKLMLHQNKLVGQIPDSISKLEMLSYLDLHGNKLNGSIPRSMGQLNHLLVLDLSYNHLTGSIPEEVIAGFKDMQMYLNLSYNHLVGSVPTELGMLEMTQAIDISNNNLSGFLPKTLAGCRNLFSLDFSGNNISGPIPAEAFSHMDLLQSLNLSRNHLEGEIPEILAELKNLSSLDLSRNNLKGTIPEGFASLSSLMHLNLSFNQLEGPVPLTGIFSHINASSMMGNQDLCGAKFLGSCRESGHSLSKKSISIISALGSLAIILLLVFVVLILSRGTKFCNSKQSDNSENYEPEYSSALALKRFNPNELENATGFFRPDNIIGASSLSTVYKGQLEDGQIVAIKRLNLHQFSANTDKIFKREASTLSQLRHRNLVKVLGYAWESGKMKALVIEYMENGNLDSIIHDKGVDQSRWTLSERLRVFISIASGLDYLHSGYDFPIVHCDLKPSNILLDRDWEAHVSDFGTARILGLHLQDGSTLSSSAALQGTVGYLAPEFAYMRQVTTKADVFSFGIIIMEFLTKRRPTGLSEEDGLPSSLREVVAKALANGMEQLVNIVDPMLTSNDKEDHVQVLAGLFKLSLGCTFPDPEDRPNMNEVLSTLVKLKTAR* 1161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01616 1160 SUPERFAMILY Protein kinase-like (PK-like) 842 1153 IPR011009 -
Rops2g01616 1160 SUPERFAMILY RNI-like 471 767 - -
Rops2g01616 1160 ProSitePatterns Serine/Threonine protein kinases active-site signature. 993 1005 IPR008271 GO:0004672|GO:0006468
Rops2g01616 1160 ProSiteProfiles Protein kinase domain profile. 868 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01616 1160 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 828 946 - -
Rops2g01616 1160 Gene3D Ribonuclease Inhibitor 26 175 IPR032675 -
Rops2g01616 1160 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 520 618 - -
Rops2g01616 1160 FunFam MDIS1-interacting receptor like kinase 2 isoform A 182 280 - -
Rops2g01616 1160 Pfam Leucine rich repeat 529 587 IPR001611 GO:0005515
Rops2g01616 1160 Pfam Leucine rich repeat 653 710 IPR001611 GO:0005515
Rops2g01616 1160 Pfam Leucine rich repeat 718 758 IPR001611 GO:0005515
Rops2g01616 1160 Pfam Leucine rich repeat 384 442 IPR001611 GO:0005515
Rops2g01616 1160 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 619 795 - -
Rops2g01616 1160 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Rops2g01616 1160 Gene3D Ribonuclease Inhibitor 277 379 IPR032675 -
Rops2g01616 1160 SUPERFAMILY L domain-like 310 541 - -
Rops2g01616 1160 FunFam Piriformospora indica-insensitive protein 2 281 376 - -
Rops2g01616 1160 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 27 181 - -
Rops2g01616 1160 SMART LRR_sd22_2 310 333 - -
Rops2g01616 1160 SMART LRR_sd22_2 214 240 - -
Rops2g01616 1160 SMART LRR_sd22_2 550 573 - -
Rops2g01616 1160 SMART LRR_sd22_2 142 168 - -
Rops2g01616 1160 SMART LRR_sd22_2 358 381 - -
Rops2g01616 1160 SMART LRR_sd22_2 721 744 - -
Rops2g01616 1160 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 377 471 - -
Rops2g01616 1160 Gene3D Ribonuclease Inhibitor 626 799 IPR032675 -
Rops2g01616 1160 SMART serkin_6 868 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01616 1160 Gene3D Transferase(Phosphotransferase) domain 1 947 1160 - -
Rops2g01616 1160 CDD STKc_IRAK 874 1156 - -
Rops2g01616 1160 Gene3D Phosphorylase Kinase; domain 1 829 946 - -
Rops2g01616 1160 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 947 1160 - -
Rops2g01616 1160 Gene3D Ribonuclease Inhibitor 383 616 IPR032675 -
Rops2g01616 1160 SMART LRR_typ_2 142 166 IPR003591 -
Rops2g01616 1160 SMART LRR_typ_2 430 454 IPR003591 -
Rops2g01616 1160 SMART LRR_typ_2 697 720 IPR003591 -
Rops2g01616 1160 SMART LRR_typ_2 334 357 IPR003591 -
Rops2g01616 1160 SMART LRR_typ_2 550 574 IPR003591 -
Rops2g01616 1160 SMART LRR_typ_2 358 381 IPR003591 -
Rops2g01616 1160 SMART LRR_typ_2 382 406 IPR003591 -
Rops2g01616 1160 SMART LRR_typ_2 672 696 IPR003591 -
Rops2g01616 1160 SMART LRR_typ_2 502 526 IPR003591 -
Rops2g01616 1160 SMART LRR_typ_2 214 238 IPR003591 -
Rops2g01616 1160 SMART LRR_typ_2 721 744 IPR003591 -
Rops2g01616 1160 SMART LRR_typ_2 598 622 IPR003591 -
Rops2g01616 1160 SMART LRR_typ_2 286 310 IPR003591 -
Rops2g01616 1160 SMART LRR_typ_2 745 770 IPR003591 -
Rops2g01616 1160 SUPERFAMILY L domain-like 30 313 - -
Rops2g01616 1160 Gene3D Ribonuclease Inhibitor 176 276 IPR032675 -
Rops2g01616 1160 PRINTS Leucine-rich repeat signature 721 734 - -
Rops2g01616 1160 PRINTS Leucine-rich repeat signature 601 614 - -
Rops2g01616 1160 Pfam Protein kinase domain 871 1151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01616 1160 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 397 1151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01616 Rops-Chr2 24411845 24416246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01616 20 1157 Receptor kinase-like Gene Family AT5G46330 54.926 0.0 1158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops2g01616 Pkinase 1.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01616 K13420 - gmx:100817960 1877.83