Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01587 ATGCAGTTTGTTGGAAATTCCGATTCTGTAATCAAAGTTGCACCTGGTAATATGGAGCTCATTGAGGTCGCCCCCGGACTTGATAAACTTAAATTGCTCCTTTCAGAAAACCCTTACAGGTTTGAGGAGTATGACATGGAAAATTCAGAAGAGAATCAGGAATCTAGAAAAGGATTATATAACCGGAATGATCTTACAGACAATATTCAAGCTAGTGATGAGGAATTAAGGTCTGCACTGCAAGCTCTTTCAGCTGTGGAGATTAATGGCTCCGCAAGAGGAAGACTCATTAGCTCCTTCGTTGCAGCTCCTCGACCCATTGCTAACGTTGCATCTTGGCTGGTCACAGGTGCCACACAAGCTGCATGGGTGTGCATGGAGAGTAGGAAAGAAAGGTAA 399 0.4386 MQFVGNSDSVIKVAPGNMELIEVAPGLDKLKLLLSENPYRFEEYDMENSEENQESRKGLYNRNDLTDNIQASDEELRSALQALSAVEINGSARGRLISSFVAAPRPIANVASWLVTGATQAAWVCMESRKER* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01587 132 Pfam Sister chromatid cohesion protein Dcc1 10 93 IPR019128 GO:0007064|GO:0031390
Rops2g01587 132 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 8 93 IPR019128 GO:0007064|GO:0031390
Rops2g01587 132 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01587 Rops-Chr2 23980444 23980941 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01587 6 93 C3H Transcription Factor Family AT2G44580 48.936 7.06e-21 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01587 K11271 - gmx:100817511 117.087