Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01543 ATGAAGCTACACAGAGCAAGCCAATATGCTTGGCAAGCAATAAAAAAGCTATGTACAGAGCATGGAGAAGTTCAACTCCACCACTTCCACCTCTTATGTAGCCTAGGATGCGGGAGTGTTGGAAATGTTTTCCTCTGCGAGATTAAACATTCTTTGAAGCCACACCCCAATTGCTATTATGCCATGAAAGTAGTGAACACAAAGGCTCTTATGTTGAAAAATAAGTTGAAGAGGGCAGAGATGGAGAAGGAAGTGATGAGTTTGCTTGACCACCCTTTTTTGCCAACCCTTTATGCTAAATTTAACGCTTATCAACACTTATGTTTAGTCATGGATTACTGCCCTGGTAGTGACTTGTTTACACTTTAG 369 0.4092 MKLHRASQYAWQAIKKLCTEHGEVQLHHFHLLCSLGCGSVGNVFLCEIKHSLKPHPNCYYAMKVVNTKALMLKNKLKRAEMEKEVMSLLDHPFLPTLYAKFNAYQHLCLVMDYCPGSDLFTL* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01543 122 PANTHER FLIPPASE KINASE 1-RELATED 2 122 - -
Rops2g01543 122 Gene3D Phosphorylase Kinase; domain 1 12 122 - -
Rops2g01543 122 Pfam Protein kinase domain 30 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01543 122 ProSiteProfiles Protein kinase domain profile. 29 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01543 122 Coils Coil 62 82 - -
Rops2g01543 122 SUPERFAMILY Protein kinase-like (PK-like) 12 121 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01543 Rops-Chr2 22929465 22929833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01543 2 122 AGC Kinase Gene Family AT5G55910 47.934 6.28e-36 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops2g01543 Pkinase 1.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01543 K08286 - pop:7454701 153.295