Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01533 ATGAGTGGGACAAAGTTGGTGAACATGATAAATGGGTTGATCTTTTTCCCAACAATTATTACAAAAGCACAAACAATTCAAGTAATCGAAAGCGGTGAATTAGAAAGCCGAAATGGAGCATTGCAGTTGATGAATGCAGAAATTCACATACTTTCACCCTTGGTTCCTACTCGGGAATTCGTCTTCCTTCGATACTGTAAACAAGTTGAAGTAGGGGCATGGGTGATAGCAGATGTATCATTCAATTCATCAGAATATAATTCCACTCTTTCTCGAGCTTGGAGGTTTCCCTCCGGATGCTTGATTCAGGAAATTACTAATGAGTCTTGCAGGGTTTCTTGGGTGGAACACGTAGAAGTGGATGATAAGATCCAAACTGACCGGCTTTTCAGGGAAGTCATTTGTGAAAATAATTCATATGGTGCAGAAAAATGGCTTTTTACACTTGAAAGAATGTGTGAGAGAATTGCATGCACCTCACTTGAAAACCCACCTAATTATGAGGTTGAAGGAGTGATCAGATTACCTGAAGAAAGGAGGAGTGTGATGCAACTAGCACATCGTATGGTTAAGATTTTCTGTAGAACACTGGACATGTCAGACAACATGGACTTCCCACATTTCAGTAATGGAGGGGTTAGGGTGTGTGTTCGCAATAACAGAGAGCCCGGTGTGCCAAATGGCACGATTGTCAGTGCTGCTTCCTCTTTTTGGCTTCCTGTCTCTCCTCAGAATGTTTTTGACTTCTTGAAAGATAATAACAGACGAGTACAGTGGGATGTTCTATGCTATGGAAATCCAGTGCACCAGATTCAAAGCATCTCAAGTCAAACTCATCCTGGCAACTGTACTTCAATTATTCGGCCTTTCGTCCCTAAAGAGAGCGATATGTTGATTCTACAAGAGAGTTACATAGATCCATTAGGATCATTGTTGATATATGCTCCTTTAGATGTAGCAACATTGAATGTCGCAATGAGGGGAGAAGACTCTTCACTGTTGCCTCTTCTTCCATCTGGCTTTACCATATCGGGAGATGGTCGATCAAATGCTGTTGCTGGAGGCAAATTAGGAGGTTCGTTGATAACTCTTGCGTACCAAATAATGGCTTGCAGTGCATCTAAAATGGAGCAACTAGACATGGAATCTGTGGCCACTGTCACTACACTAGTAACCTCAACAGTGGAGAAAATTAAAGTTGCTTTGAATTGTTCCAATTTGGACTAA 1227 0.414 MSGTKLVNMINGLIFFPTIITKAQTIQVIESGELESRNGALQLMNAEIHILSPLVPTREFVFLRYCKQVEVGAWVIADVSFNSSEYNSTLSRAWRFPSGCLIQEITNESCRVSWVEHVEVDDKIQTDRLFREVICENNSYGAEKWLFTLERMCERIACTSLENPPNYEVEGVIRLPEERRSVMQLAHRMVKIFCRTLDMSDNMDFPHFSNGGVRVCVRNNREPGVPNGTIVSAASSFWLPVSPQNVFDFLKDNNRRVQWDVLCYGNPVHQIQSISSQTHPGNCTSIIRPFVPKESDMLILQESYIDPLGSLLIYAPLDVATLNVAMRGEDSSLLPLLPSGFTISGDGRSNAVAGGKLGGSLITLAYQIMACSASKMEQLDMESVATVTTLVTSTVEKIKVALNCSNLD* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01533 408 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 14 403 IPR042160 -
Rops2g01533 408 Pfam START domain 20 155 IPR002913 GO:0008289
Rops2g01533 408 Gene3D - 20 134 IPR023393 -
Rops2g01533 408 ProSiteProfiles START domain profile. 1 158 IPR002913 GO:0008289
Rops2g01533 408 SUPERFAMILY Bet v1-like 20 156 - -
Rops2g01533 408 SUPERFAMILY Bet v1-like 176 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01533 Rops-Chr2 22810552 22812699 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01533 6 404 Homeobox Transcription Factor Family AT1G17920 45.700 3.12e-115 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01533 K09338 - zju:107415744 476.863