Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01527 ATGAGTTCAGTGGCAGCATATTCAGTTGGGACTTACCTTAATTCCTTGCAGCCCCTAAAAACTAACTATTCAGCACCAAAATCATTACCTTTTAATTATGTAAAATGTGGTGTCCAAGTCCAACCACTACCACTGGTACAAAAGGAGAGTCAATTCAAGAGAAGAGAAGCAATTGGCCTTGCCTTGAGTTTTGGCCTTCTTCATACTTTCTTGCAACCACAACCCACATCAGCAGCAGAAGAAGAAGCAGTTCCATGTGAATTAAAAGTAGCTCCTTCAGGCCTTGCCTTCTGTGATAAAACTGTAGGCACTGGTCCTCAAGCTGTTAAGGGACAGCTTATTAAGGCACATTATGTAGGGAGATTGGAGAATGGGAAAATTTTCGACAGCAGTTACAATCGTGGCAAGCCACTTACGTTTCGCGTTGGTGTTGGAGAGGTCATCAAAGGATGGGATGAAGGCATTTTAGGAGGTGATGGAGTTCCTCCCATGCTTGCAGGAGGGAAACGCACATTAAAGCTTCCTCCAGAACTTGGATATGGCTCAAGAGGGGCTGGTTGTAGAGGAGGTTCATGTGTCATTCCGCCTGATTCGGTACTCTTATTTGAAGTGGAGTTTGTTAGCAAAGGATAA 633 0.4408 MSSVAAYSVGTYLNSLQPLKTNYSAPKSLPFNYVKCGVQVQPLPLVQKESQFKRREAIGLALSFGLLHTFLQPQPTSAAEEEAVPCELKVAPSGLAFCDKTVGTGPQAVKGQLIKAHYVGRLENGKIFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPPMLAGGKRTLKLPPELGYGSRGAGCRGGSCVIPPDSVLLFEVEFVSKG* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01527 210 FunFam Peptidylprolyl isomerase 83 209 - -
Rops2g01527 210 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 106 206 IPR001179 GO:0003755
Rops2g01527 210 Gene3D - 82 209 IPR046357 GO:0003755
Rops2g01527 210 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 81 208 IPR044183 GO:0009507
Rops2g01527 210 SUPERFAMILY FKBP-like 88 208 - -
Rops2g01527 210 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 111 210 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01527 Rops-Chr2 22646649 22648983 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01527 111 208 Calmodulin-binding Proteins AT5G48570 40.816 4.12e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01527 K01802 - gmx:100778390 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01527 2 22646649 22648983 Rops2g01527 2 22646649 22648983 ECH