Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01526 ATGATGGAAGTGAGAGGAAAGCACAAGCAAGCAAGACACAGAGGGTTTGAGGTGATAGATGATATCAAGGCAGAACTGGAGAAGCATTGCCCCAAGACTGTTTCTTGTGCTGACATTCTCACTGCTGCCACTAGAGATGCTACTGTTGAGTTGGGTGGTCCATACTGGGCAGTTCCTTATGGTAGGAAAGATGGGTTGGTCTCCATTGCCAAGGAAGCTGAAATGGTGCCAATGGGTCATGAAAACATTACTTCCTTGGTTGAGTTTTTCCAATCCAAGGGCCTGAATGTGCTTGATTTAGTTGTGCTCTCTGGGGCTCATACCACTGGAAGGGCTTCATGTGGATCCATTCAATATAGGCTATACAACTACCAAGGAACCGGGAAACCAGACCCAACCATAGATCCCAAGTACCTCAACTTGTTGCAAAGAAAGTGTGGACAGGCCTCAGATTACGTGTATCTTGATGCTACAACGCCAAGAACCTTTGATCCTGTGTACTACTTAAATCTTAAGAAGAAAATGGGGTTGTTATCCACAGATCAATTGTTATATTCTGATCCAAGGACTTCTCCCATTGTTTCTGCATTTGCTTCAGCGCCATACATTTTCAAGCACCAGTTCGCAGTGTCCATGGCAAAGCTTGGTATCGTTGAAGTTCTCACTGGCCAGGATGAAGGGGAGATTAGGACCAACTGTAATTTTGTCAATGGTTATTGA 720 0.4472 MMEVRGKHKQARHRGFEVIDDIKAELEKHCPKTVSCADILTAATRDATVELGGPYWAVPYGRKDGLVSIAKEAEMVPMGHENITSLVEFFQSKGLNVLDLVVLSGAHTTGRASCGSIQYRLYNYQGTGKPDPTIDPKYLNLLQRKCGQASDYVYLDATTPRTFDPVYYLNLKKKMGLLSTDQLLYSDPRTSPIVSAFASAPYIFKHQFAVSMAKLGIVEVLTGQDEGEIRTNCNFVNGY* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01526 239 Pfam Peroxidase 13 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g01526 239 SUPERFAMILY Heme-dependent peroxidases 13 237 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops2g01526 239 Gene3D Peroxidase, domain 2 77 215 - -
Rops2g01526 239 CDD secretory_peroxidase 14 236 IPR033905 GO:0004601|GO:0042744
Rops2g01526 239 PANTHER - 13 237 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g01526 239 ProSiteProfiles Plant heme peroxidase family profile. 14 237 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g01526 239 PRINTS Haem peroxidase superfamily signature 99 114 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g01526 239 PRINTS Haem peroxidase superfamily signature 156 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g01526 239 PRINTS Haem peroxidase superfamily signature 34 51 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g01526 239 PRINTS Haem peroxidase superfamily signature 52 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops2g01526 239 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g01526 239 PRINTS Plant peroxidase signature 33 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g01526 239 PRINTS Plant peroxidase signature 170 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g01526 239 PRINTS Plant peroxidase signature 14 27 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g01526 239 PRINTS Plant peroxidase signature 210 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g01526 239 PRINTS Plant peroxidase signature 98 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g01526 239 PRINTS Plant peroxidase signature 52 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops2g01526 239 Gene3D - 8 237 - -
Rops2g01526 239 FunFam Peroxidase 77 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01526 Rops-Chr2 22642130 22642953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01526 14 237 Peroxidase AT1G30870 62.389 1.75e-95 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01526 K00430 - gmx:100798229 392.889