Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01525 ATGAGGATTTCAACACTTGCAGTAGTTGTGCTCCTTGTGTGCCTTTTTGAGATTTTACTAGTCCTTGGCCAGGGCAACTTAGACAAAGAGACAACTTTGAGAGTGCTTTTGGAAGTGAAGAAGTCCTTTGTGCAAGACCCACAAAATGTTTTGAGGGATTGGTCAGAGGAAAACACAGACTACTGTAGTTGGAGAGGGGTGTCATGTGGAACGAACTCAAACTCTTTGGATGATGACTCGGTGCATGTGGTGGGTCTTAACCTTTCTGACTCGTCACTCACCGGGTCAATATCACCTTCACTCGGTCGTTTGCATAACCTGATCCACCTGGATCTCTCCTCCAATAACCTCATGGGTCCCATTCCACCAAATCTCTCTAACCTTGTTTCCTTGGAATCTATGCTTCTCTTCTCTAACCAACTCACTGGTCCCATTCCCACTGAGTTTGGCTCGCTCACGAATCTCCGAGTCATGCGAATCGGTGACAATGCATTAACGGGTATGATTCCCGCGTCTCTTGGGAGCCTGTCTAACCTGGTCAACCTTGGTCTCGCTTCCTGTGAACTCACCGGGTCGATTCCACCTCAACTCGGACAACTCAGTCTCTTGGAGAATCTGATTCTGCAGGACAACGAGTTGATGGGTCCGATTCCGACCAAGTTGGGGAACTGCTCAAGCCTCACCATCTTCACTGCTGCTAACAACAAACTCAATGGCTCAATTCCGAGTGAACTGGGTCAACTCAAGAGTCTAAAAACTCTCAACCTTGCCAACAACAGCTTATCAGGGGAGATTCCGAGTCAACTCGGTGATATGAGTGAGCTTGTTTACCTGAATTTCATGGGGAACCAGCTTGAGGGTGCTATTCCACCGTCTCTAGCTCAACTGGGTAATCTTCAAAATCTGGACTTTTCCATGAACAAGCTCAGTGGAGGAATTCCAGAGGAGTTGGGCAACATGGGTCAGTTAGCTTACATGGTTCTGTCTGGTAACAACCTCAATGGAATCATACCAAGAACCATATGTTCCAATGCAACAAGTTTGGAACACTTGATGCTATCAGAAAGTGGACTTCATGGTGAGATCCCAGCTGAGTTGGGTCAGTGCCAATCACTGAAACAACTTGACTTGTCTAACAATTCACTCAATGGGTCCATACCTCTTGAGCTTTATGGGTTGTTAGGGTTAACTGATCTTTTGCTCAACAACAACAGCTTGGTTGGTTCCATCTCTCCCTTCATAGGGAACCTCGGTAGCTTGCAGACACTTGCTATGTTTCACAACAATTTGCAGGGTGCTCTTCCCAGAGAGATTGGAATGCTTGGCGAGTTGGAAATTTTATATCTCTATGATAATCAAATATCTGGGGTTATACCTACGGAAATTGGTAATTGTTCTAGCTTGCAAATGATTGATTTCTTTGGAAACCATTTCAGCGGGGAAATTCCCATCACTATTGGAAGGTTGAGAGAGTTGAATTTCCTGCACATTAGGCAGAATGAGCTTGTAGGTGAGATTCCAGCCACCTTGGGTAACTGTCATAAACTGAACATCCTGGATCTGGCGGACAATCAGCTCTCTGGTGCTATTCCTGCAACATTTGGATTTCTCAAGTCATTGCAGCAGCTCATGCTCTACAACAATTCTCTAGAAGGTAACCTCCCTCACCAACTGATAGAAGTAGCAAACTTGACAAGAGTGAACCTTTCACAGAACAGACTGAATGGTAGTATATCTGCATTGTGTAGCTCTCGATCGTTTCTTTCTTTCGATGTTACCAACAATGAGTTTGACGGAGAAATTCCGCCTCAACTGGGAAATTCACCCTCCCTTGAGAGGCTAAGATTAGGTAACAACAAATTTTCTGGTGAGATTCCAAGGACATTGGGAAAAATCCATGAGCTGTCACTGTTAGACCTCTCAGGAAATTCACTCACCGGTCCAATACCAGCTGAGCTTTCTTTGTGCAATAAAATGGCTCACATTGATTTAAACAGTAATCTTCTTTATGGACCAATACCGTCATGGCTTGGAACATTGCCTCAGTTGGGAGAGCTTAAGCTCTTCTCCAATAATTTTTCTGGACCTCTTCCATCAGGCCTATTCAATTGTTCCAAATTACTAGTTCTTTCTCTACATGACAACTCTCTCAATGGAAGTCTCCCAACTGATATTGGTGATCTTGCAAACCTTAACGTCCTCAGACTTGACCATAATAATATCTCTGGACCAATCCCTCCAGAAATAGGTAAGTTGAGCAAGCTTTATGAGCTCCAGCTCTCCAGGAATAGCTTTGATGGTGAGTTGCCAGCTGAGATCGGAAAACTTCAAAATATCCAAATCATTTTGGACCTAAGTTACAACAATCTCTCAGGTCATATTCTACCTTCTCTTGGGACCCTGTCAAAATTAGAAGCACTGGATCTTTCCCACAATCAACTCACTGGAAAAATCCCTCCACAGGTTGGTGAAATGAGCAGCTTGGGAAAGCTTGATCTCTCTTACAACAACCTTCAAGGAAAATTGGACAAGCAGTTCTCCCGCTGGCCAGATGAGGCATTTGAAGGGAACATACATCTTTGTGGAAGCCCTCTTGAGCGCTGCAACAGTGACGATACTTCTGGCAATGAGCAGTCAGGCCTAAGTGAGTCATCAGTAGTGATAATATCTGCCGTTTCAACTCTGGCTGCAGTTGCACTATTGATACTTACAGTGAGAATCTTCTTCAAAAACAAGCAAGAATTTTTTAGGAAAGACAATGAAGTGATTCATGTTTACTCCTCCTCGTCATCACAAGCACAGAGACGACCGCTGTTCCAACTAAATGCTGCTGGAAAGAGAGATTTCAGGTGGGAAGATATCATGGATGCCACAAACAATTTAAGTGATGACTTCATGATTGGTTCTGGAGGTTCAGGGAAAATCTACAAAGCTGAATTGGCCACTGGAGAGACAGTGGCTGTCAAGAAGATTTCATCAAAAGATGATTTTCTGTTAAACAAAAGCTTCATAAGAGAAGTAAAGACACTAGGGAGGATTAGGCATAGACATCTGGTGAAGCTAATGGGATATTGTAGTAGCAATAGAAACAAAGGAGCAGATTGGAATCTGTTGATATATGAGTACATGGAGAATGGGAGTATATGGGAATGGCTTCATGGGAAACCAGCCAAGGCAAGCAAAGTAAAGAAGAGCCTTGATTGGGAGACAAGGTTCAAAATAGCTGTGGGATTAGCTCAAGGAGTGGAGTACCTTCATCACGATTGTGTGCCGAAGATTATTCACAGGGACATCAAATCCAGCAACGTATTGCTAGATTCTAAAATGGAGGCACACTTGGGAGATTTTGGACTGGCAAAAGCACTCGTTGAGAATTATGACTCCAATACTGAGTCTAATTCCTGGTTTGCTGGGTCTTACGGCTACATGGCTCCAGAATATGCATTTTCCCTACAGGCAACTGAAAAAAGTGATGTTTACAGCATGGGAATCGTTCTTATGGAACTTGTTAGTGGTAAAATGCCAACAGATGACTTTTTTGGAGCAGAGATGGATATGGTGAGATGGGTGGAGATGCATGTTGGTATGCATGGCTCTGCCCGTGAGGAATTGATAGATCCTGAGCTGAAACCTCTTTTACCTGGCGAAGAGTTTGCTGCATTCCAAGTGCTTGAGATAGCCTTGCAGTGCACCAAAACTACACCACAGGAGAGGCCATCTTCAAGGAAAGTATGCGATCTTCTCCTCCATGTATTCAACAACAGAATGATGGACTCTAAGAAAAGATGA 3789 0.4384 MRISTLAVVVLLVCLFEILLVLGQGNLDKETTLRVLLEVKKSFVQDPQNVLRDWSEENTDYCSWRGVSCGTNSNSLDDDSVHVVGLNLSDSSLTGSISPSLGRLHNLIHLDLSSNNLMGPIPPNLSNLVSLESMLLFSNQLTGPIPTEFGSLTNLRVMRIGDNALTGMIPASLGSLSNLVNLGLASCELTGSIPPQLGQLSLLENLILQDNELMGPIPTKLGNCSSLTIFTAANNKLNGSIPSELGQLKSLKTLNLANNSLSGEIPSQLGDMSELVYLNFMGNQLEGAIPPSLAQLGNLQNLDFSMNKLSGGIPEELGNMGQLAYMVLSGNNLNGIIPRTICSNATSLEHLMLSESGLHGEIPAELGQCQSLKQLDLSNNSLNGSIPLELYGLLGLTDLLLNNNSLVGSISPFIGNLGSLQTLAMFHNNLQGALPREIGMLGELEILYLYDNQISGVIPTEIGNCSSLQMIDFFGNHFSGEIPITIGRLRELNFLHIRQNELVGEIPATLGNCHKLNILDLADNQLSGAIPATFGFLKSLQQLMLYNNSLEGNLPHQLIEVANLTRVNLSQNRLNGSISALCSSRSFLSFDVTNNEFDGEIPPQLGNSPSLERLRLGNNKFSGEIPRTLGKIHELSLLDLSGNSLTGPIPAELSLCNKMAHIDLNSNLLYGPIPSWLGTLPQLGELKLFSNNFSGPLPSGLFNCSKLLVLSLHDNSLNGSLPTDIGDLANLNVLRLDHNNISGPIPPEIGKLSKLYELQLSRNSFDGELPAEIGKLQNIQIILDLSYNNLSGHILPSLGTLSKLEALDLSHNQLTGKIPPQVGEMSSLGKLDLSYNNLQGKLDKQFSRWPDEAFEGNIHLCGSPLERCNSDDTSGNEQSGLSESSVVIISAVSTLAAVALLILTVRIFFKNKQEFFRKDNEVIHVYSSSSSQAQRRPLFQLNAAGKRDFRWEDIMDATNNLSDDFMIGSGGSGKIYKAELATGETVAVKKISSKDDFLLNKSFIREVKTLGRIRHRHLVKLMGYCSSNRNKGADWNLLIYEYMENGSIWEWLHGKPAKASKVKKSLDWETRFKIAVGLAQGVEYLHHDCVPKIIHRDIKSSNVLLDSKMEAHLGDFGLAKALVENYDSNTESNSWFAGSYGYMAPEYAFSLQATEKSDVYSMGIVLMELVSGKMPTDDFFGAEMDMVRWVEMHVGMHGSAREELIDPELKPLLPGEEFAAFQVLEIALQCTKTTPQERPSSRKVCDLLLHVFNNRMMDSKKR* 1263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01525 1262 ProSitePatterns Protein kinases ATP-binding region signature. 967 990 IPR017441 GO:0005524
Rops2g01525 1262 SUPERFAMILY Protein kinase-like (PK-like) 945 1248 IPR011009 -
Rops2g01525 1262 PANTHER UNNAMED PRODUCT 537 1177 - -
Rops2g01525 1262 Gene3D Ribonuclease Inhibitor 290 386 IPR032675 -
Rops2g01525 1262 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 580 872 - -
Rops2g01525 1262 PRINTS Leucine-rich repeat signature 801 814 - -
Rops2g01525 1262 PRINTS Leucine-rich repeat signature 372 385 - -
Rops2g01525 1262 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 202 273 - -
Rops2g01525 1262 SUPERFAMILY L domain-like 584 843 - -
Rops2g01525 1262 Pfam Leucine Rich Repeat 106 128 IPR001611 GO:0005515
Rops2g01525 1262 Pfam Leucine Rich Repeat 803 820 IPR001611 GO:0005515
Rops2g01525 1262 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 922 1042 - -
Rops2g01525 1262 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 289 388 - -
Rops2g01525 1262 SUPERFAMILY L domain-like 56 338 - -
Rops2g01525 1262 SUPERFAMILY L domain-like 302 648 - -
Rops2g01525 1262 Gene3D Ribonuclease Inhibitor 29 186 IPR032675 -
Rops2g01525 1262 Pfam Leucine rich repeat N-terminal domain 34 69 IPR013210 -
Rops2g01525 1262 Pfam Leucine rich repeat 515 574 IPR001611 GO:0005515
Rops2g01525 1262 SMART serkin_6 961 1253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01525 1262 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 483 579 - -
Rops2g01525 1262 Gene3D Transferase(Phosphotransferase) domain 1 1043 1261 - -
Rops2g01525 1262 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 29 196 - -
Rops2g01525 1262 FunFam Leucine-rich repeat receptor-like protein kinase 1043 1262 - -
Rops2g01525 1262 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1093 1105 IPR008271 GO:0004672|GO:0006468
Rops2g01525 1262 ProSiteProfiles Leucine-rich repeat profile. 803 825 IPR001611 GO:0005515
Rops2g01525 1262 SMART LRR_typ_2 176 200 IPR003591 -
Rops2g01525 1262 SMART LRR_typ_2 489 513 IPR003591 -
Rops2g01525 1262 SMART LRR_typ_2 248 272 IPR003591 -
Rops2g01525 1262 SMART LRR_typ_2 296 320 IPR003591 -
Rops2g01525 1262 SMART LRR_typ_2 441 465 IPR003591 -
Rops2g01525 1262 SMART LRR_typ_2 728 752 IPR003591 -
Rops2g01525 1262 SMART LRR_typ_2 680 704 IPR003591 -
Rops2g01525 1262 SMART LRR_typ_2 825 856 IPR003591 -
Rops2g01525 1262 SMART LRR_typ_2 632 656 IPR003591 -
Rops2g01525 1262 SMART LRR_typ_2 104 128 IPR003591 -
Rops2g01525 1262 SMART LRR_typ_2 801 823 IPR003591 -
Rops2g01525 1262 SMART LRR_typ_2 152 175 IPR003591 -
Rops2g01525 1262 SMART LRR_typ_2 369 393 IPR003591 -
Rops2g01525 1262 SMART LRR_typ_2 537 561 IPR003591 -
Rops2g01525 1262 FunFam Uncharacterized protein 389 482 - -
Rops2g01525 1262 Gene3D Ribonuclease Inhibitor 581 876 IPR032675 -
Rops2g01525 1262 Pfam Protein kinase domain 966 1245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01525 1262 Gene3D Phosphorylase Kinase; domain 1 922 1042 - -
Rops2g01525 1262 ProSiteProfiles Protein kinase domain profile. 961 1253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01525 1262 Gene3D Ribonuclease Inhibitor 483 580 IPR032675 -
Rops2g01525 1262 Gene3D Ribonuclease Inhibitor 187 289 IPR032675 -
Rops2g01525 1262 Gene3D Ribonuclease Inhibitor 387 482 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01525 Rops-Chr2 22611740 22615632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01525 1 707 Receptor kinase-like Gene Family AT1G17750 35.574 8.33e-101 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops2g01525 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01525 - - gmx:100801889 2114.35