Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01500 ATGTCAATGGCTGCTCCAAGTTCCCTTCTGAAGGTGGAGGAAATACAAGGAAGAGGGAGGGGGATGGTTGCATCTCAGCCTCTTAAAGCTGGCCAAATTGTCCTCAGAGACTCTCCAATCCTGCTGTATTCTGCCTTGCCGTTGACCATGCAGTCTTCATCATCGTCCTCCTCTGCAGAAGCCTCATGCTTCTGTGATCACTGCTTCAGAATTTTATCACCATCTTTACAGCAAGATTCTTCATCATCCCCAGTTTTATGCCCTTCTTGTTGCCACCATCGCTTCTGCAGCTCAAGTTGTCTCTCAATGGCACTGAACTCCTCCCATTGTTCTTGGGTATGTCAAGCATTATCTCGTCTTCGAGCCAATTCTCTACTGCTTGAACAGCCCCTTGAGTGCCAAGTCCAAGCTGGTTTTCTCATTGCTGCCTACAATCTTGCCAATATCTCCCCCTCAAACTTTCAAATTTTGATATCTCTTCAGGGTTCTCCTGATGATGCCACCATTGCTGCAGCTCAGTTCCTACACCCCCTTATTTCATCCCTCTATTCACTTGCTCTCATTAGCCCCCCGAATGGATTTTCTCTAGAACTTACGTCTGCACTTCTGGCCAAGGACAAGCTCAATGCTTTTGGCATAATGCAGCCCTTCTCTGAAGATAATGAGCAGAGGTCTGTCAGAGCTTATGGTATTTACCCCTATGCCTCCTTTTTTAACCATGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTGGACTCTAGTCCACCTGATGACAGCCATAACACTGATTTTATTATTAGGATGATTCATGATGTACCCCAAGGTAGGGAAATCTGTTTGAGTTATTTCCCTGTGAATGAAAACTATTCTAGTAGGCAGAAGAGATTGATGGAAGACTACGGCTTCACCTGTAATTGTGATCGATGTAATGTAGAATCAAATTGGTCAGATAATGAGAGTGTTGAAGATAATGCAGAGGATGAAGAAGAGGTTATGGATGAGGACCAACATGAAACTATGGCAGCATCAGACAATGACAATAATCCCCATGGAGATAATAACGATTTCCCACATGCTTATTTCTTTTTAAGATACATAGTGACAATGACTTTGATATTAACGAAGGGCAAGATGAAGTTCCCATGGAGGACTGAGCTGTTGGGATGCCACTTTTGTATTGTTGCATGTAATGGAGGGAATTCTACCCAGATTTTGAGCAAATCACACTCTGTACAAACGGAGACAAATGCTTACAAGTTGCACAACTCAGGAATCAAATGGGACTTTACTTCAAATCCTAAACATTTTGTGGTATGTTGTCAAGTGAGTAATTGTTAG 1341 0.4303 MSMAAPSSLLKVEEIQGRGRGMVASQPLKAGQIVLRDSPILLYSALPLTMQSSSSSSSAEASCFCDHCFRILSPSLQQDSSSSPVLCPSCCHHRFCSSSCLSMALNSSHCSWVCQALSRLRANSLLLEQPLECQVQAGFLIAAYNLANISPSNFQILISLQGSPDDATIAAAQFLHPLISSLYSLALISPPNGFSLELTSALLAKDKLNAFGIMQPFSEDNEQRSVRAYGIYPYASFFNHDCLPNACRFDYVDSSPPDDSHNTDFIIRMIHDVPQGREICLSYFPVNENYSSRQKRLMEDYGFTCNCDRCNVESNWSDNESVEDNAEDEEEVMDEDQHETMAASDNDNNPHGDNNDFPHAYFFLRYIVTMTLILTKGKMKFPWRTELLGCHFCIVACNGGNSTQILSKSHSVQTETNAYKLHNSGIKWDFTSNPKHFVVCCQVSNC* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01500 446 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 370 IPR044238 -
Rops2g01500 446 CDD SET_SMYD 208 310 - -
Rops2g01500 446 Gene3D - 64 123 - -
Rops2g01500 446 Pfam SET domain 19 283 IPR001214 GO:0005515
Rops2g01500 446 MobiDBLite consensus disorder prediction 316 351 - -
Rops2g01500 446 SUPERFAMILY SET domain 8 306 IPR046341 -
Rops2g01500 446 SMART set_7 8 290 IPR001214 GO:0005515
Rops2g01500 446 Coils Coil 319 339 - -
Rops2g01500 446 ProSiteProfiles SET domain profile. 8 284 IPR001214 GO:0005515
Rops2g01500 446 Gene3D SET domain 21 310 IPR046341 -
Rops2g01500 446 MobiDBLite consensus disorder prediction 320 336 - -
Rops2g01500 446 Gene3D - 128 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01500 Rops-Chr2 22211880 22214901 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Rops2g01500 SET 1.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01500 - - gmx:100783406 581.637