Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01495 ATGGAGAACAACCCAGTTCAGCTTTTGCCTCATCTCACTGTGACACTCCTCCTTATGATGACTGCTTTGTTTCCTATCACTGAACAAGGTGCAGCAGTGTCTTCCATCAAGACTGATGCACAGGCTCTTCTTATGTTCAAAAAGATGATCCAGAAGGATCCAAGTGGTGTTTTGTCAAGTTGGCAGCTTAATAGGAATCCATGCAGCTGGTATGGTGTCACTTGCAAACAAGGAAGAGTTACTCAGCTTGATATTAGTGGGAATAATAATCTTGCTGGGACTATTTCTCTTGATCCACTGTCATCTTTAGATATGTTATCTGTTTTGAAATTGTCTCTGAATTCATTTTCTGTAAATTCTACTTCTTTACTTAAGCTCCCATATAGTTTGACACAGCTTGATCTCTCCTTTGGTGGAGTTACAGGTCCTGTCCCTGAGAACCTTTTCTCCAAGTGTCCAAATCTTCTTGTTGTGAATCTTTCTTACAACAACTTGACAGGCCCTATTCCTGAAAATTTCTTGCAAAACTCTGATAAACTTCAGGCCCTTGACATCTCTTCCAACAATTTGACAGGTTCAATTTCTGGTCTGAAAATGGAGTGCAATTCCTTGTTGCAACTTGATCTATCTGAAAACCGTTTATCAGACTCAATTCCAATCTCTTTGTCAAACTGCACCAGCCTTAAGAATTTGAATTTAGCCAACAATTTCATTTCTGGGGTAATCCCAAAAGCCTTGGGTCAGCTAAACAAACTACAGACTATGGATCTTTCCCACAATCAAATTACTGGCTGGATCCCTTTTGAATTGGGAAATGTATGTGCTTCACTCATAGAACTTAAACTTTCTTTCAACAACATCACAGGCTCAATCCCATCTGGTTTCTCTTCTTGCACTTCGCTGCAACTTCTTGACATTTCTAACAACAATATGTCAGGGGAAGTACCAGAGTCAATCTTTCAGAATCTTGGATCATTACAGGAACTAAGGTTGGGAAACAATAATATCTCTGGGAAATTTCCATCTTCAATATCTTCCTGCAAAAACTTAAGGATTGTGGATTTCAGCTCAAATAAAATTTATGGATCTATCCCAAGAGATATATGTCCAGGGGCAGCTTCACTTGAGGAGCTGAGAATGCCAGATAATCTCATCACAGGAGAAATCCCAGCTGAACTCTCAAAATGCTCACAACTGAAGACACTTGATTTTAGTCTGAACTACCTCAATGGTTCAATCCCTGAAGAGCTTGGAGAACTTGAAAATCTTGAGCAGCTAATAGCATGGTTCAATGGGTTGGAAGGAAAAATTCCAGCAAAGTTGGGTCAATGCAAAAATCTTAAGGATCTCATACTGAATAATAATCACCTCAGAGGTGGAATTCCCGTTGAGTTGTTCAAGTGCAGCAATCTTGAATGGATATCACTGACAAGCAATGAACTCAGTGGTGAAATACCACGTGAGTTTGGCCTCTTGACAAGGTTAGCGGTTCTGCAGCTTGGAAATAACAGCTTCACAGGTGAGATACCAGCAGAGCTATCAAATTGTAGCAGTTTGGTGTGGTTGGACTTGAACAGCAACAAGCTCACAGGAGAGATCCCTCCAAGACTTGGAAGGCAGATAGGAGCAAAATCATTGTTTGGGATCCTTTCAGGAAACACTTTGGTGTTTGTAAGAAATGTTGGAAACTCATGTAAAGGAGTTGGAGGTTTGCTAGAATTCTCTGGAATTCGACCTGAAAGGCTCTTGCAGGTGCCAACATTGAGGACTTGTGATTTCACAAGACTCTATTCTGGTCCTGTCCTCAGCTTGTTTACAAAGTACCAGACTTTGGAGTATCTTGATCTTTCCTACAATCAGCTTCGTGGAAAAATCCCAGAAGAATTTGGAGATATGGTGGCATTGCAGGTTCTTGAATTATCTCACAATCAGCTATCTGGAGAAATCCCTTCATCACTTGGCCAGCTCAAAAATTTGGGTGTGTTTGATGCCTCAAATAATAGACTGCAGGGTCATATCCCAGACTCATTCTCAAACCTCTCATTCTTAGTGCAAATTGATCTATCTAACAATGAGCTAACTGGGCAAATTCCACCTAGGGGACAACTAAGTACACTTCCAGCTTCCCAGTATGCAAACAACCCTGGTCTTTGTGGTGTTCCATTGCCTGATTGCAAGAGTGACAACAGCCAAACCACAATGAATCCAAGTGATGATATTAGCAAAGGAGGTCATAGAAGAGCAACTGCATCATGGGCAAACAGCATCGTCATGGGAATTCTCATTTCTGTTGCTTCTGTATGTATCTTGATTGTGTGGGCAATCGCAATGCGTGTACGGAGGAAGGAGGCTGAGGAAGTCAAGATGCTTAATAGCTTGCAAGCATGCCATGCTGCTACAACTTGGAAAATCGACAAAGAGAAAGAGCCTCTAAGCATTAATGTGGCAACATTTCAGAGGCAGCTGAGGAAGCTCAAGTTCTCACAGTTGATTGAAGCAACCAATGGCTTCTCAGCAGCAAGCCTTATTGGTTGTGGTGGTTTTGGTGAAGTGTTCAAAGCCACACTCAAAGACGGTTCAAGTGTTGCCATAAAGAAGCTCATTAGACTAAGCTGCCAGGGTGATAGAGAATTCATGGCTGAGATGGAAACCTTAGGGAAGATCAAGCATAGAAACCTTGTCCCTTTATTGGGATACTGCAAAGTAGGGGAAGAGAGGCTCCTTGTTTATGAGTTCATGGAGTATGGAAGCCTAGAAGAGATGCTTCATGGAAGAACCAAGACACGTGATCGACGTATTCTAACATGGGAAGAAAGGAAAAAGGTTGCAAGAGGTGCTGCAAAAGGACTTTGTTTTCTGCATCACAATTGCATCCCTCACATCATACATAGAGACATGAAATCAAGCAATGTGCTACTTGACCATGAAATGGAATCAAGGGTCTCAGATTTTGGAATGGCAAGACTTATAAGTGCCCTTGACACACATCTCAGTGTAAGCACATTAGCAGGAACACCTGGCTATGTTCCACCAGAGTATTACCAAAGTTTCAGGTGCACTGCAAAGGGAGATGTTTACTCATTTGGAGTTGTAATGTTGGAACTGCTAAGTGGTAAACGCCCTACTGATAAGGAAGACTTTGGTGACACAAACTTGGTGGGTTGGGCCAAGATGAAGGTACGTGAAGGGAAACAAATGGAAGTAATTGACCCTGATTTGCTTTTGGCAACTCAAGGAACAGATGAAGCTGAAGCCAAAGAAGTGAAAGAGATGATAAGATATTTGGAGGTTACTTTGCAATGTGTTGATGATTTGCCTTCCAGAAGGCCAAACATGTTGCAGGTAGTGGCTATGCTGAGAGAGCTTATGCCTGGATCAACTGATGGAAGCAGCAACAGTGCTTGA 3405 0.4188 MENNPVQLLPHLTVTLLLMMTALFPITEQGAAVSSIKTDAQALLMFKKMIQKDPSGVLSSWQLNRNPCSWYGVTCKQGRVTQLDISGNNNLAGTISLDPLSSLDMLSVLKLSLNSFSVNSTSLLKLPYSLTQLDLSFGGVTGPVPENLFSKCPNLLVVNLSYNNLTGPIPENFLQNSDKLQALDISSNNLTGSISGLKMECNSLLQLDLSENRLSDSIPISLSNCTSLKNLNLANNFISGVIPKALGQLNKLQTMDLSHNQITGWIPFELGNVCASLIELKLSFNNITGSIPSGFSSCTSLQLLDISNNNMSGEVPESIFQNLGSLQELRLGNNNISGKFPSSISSCKNLRIVDFSSNKIYGSIPRDICPGAASLEELRMPDNLITGEIPAELSKCSQLKTLDFSLNYLNGSIPEELGELENLEQLIAWFNGLEGKIPAKLGQCKNLKDLILNNNHLRGGIPVELFKCSNLEWISLTSNELSGEIPREFGLLTRLAVLQLGNNSFTGEIPAELSNCSSLVWLDLNSNKLTGEIPPRLGRQIGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRPERLLQVPTLRTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNQLRGKIPEEFGDMVALQVLELSHNQLSGEIPSSLGQLKNLGVFDASNNRLQGHIPDSFSNLSFLVQIDLSNNELTGQIPPRGQLSTLPASQYANNPGLCGVPLPDCKSDNSQTTMNPSDDISKGGHRRATASWANSIVMGILISVASVCILIVWAIAMRVRRKEAEEVKMLNSLQACHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGCGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEFMEYGSLEEMLHGRTKTRDRRILTWEERKKVARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLSGKRPTDKEDFGDTNLVGWAKMKVREGKQMEVIDPDLLLATQGTDEAEAKEVKEMIRYLEVTLQCVDDLPSRRPNMLQVVAMLRELMPGSTDGSSNSA* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01495 1134 PRINTS Leucine-rich repeat signature 180 193 - -
Rops2g01495 1134 PRINTS Leucine-rich repeat signature 249 262 - -
Rops2g01495 1134 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 199 274 - -
Rops2g01495 1134 Pfam Leucine rich repeat N-terminal domain 37 75 IPR013210 -
Rops2g01495 1134 SUPERFAMILY L domain-like 38 316 - -
Rops2g01495 1134 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 289 1119 - -
Rops2g01495 1134 Pfam Protein tyrosine and serine/threonine kinase 841 1118 IPR001245 GO:0004672|GO:0006468
Rops2g01495 1134 SMART LRR_typ_2 517 540 IPR003591 -
Rops2g01495 1134 SMART LRR_typ_2 680 703 IPR003591 -
Rops2g01495 1134 SMART LRR_typ_2 298 322 IPR003591 -
Rops2g01495 1134 SMART LRR_typ_2 492 516 IPR003591 -
Rops2g01495 1134 SMART LRR_typ_2 444 468 IPR003591 -
Rops2g01495 1134 SMART LRR_typ_2 632 656 IPR003591 -
Rops2g01495 1134 SMART LRR_typ_2 323 347 IPR003591 -
Rops2g01495 1134 SMART LRR_typ_2 249 272 IPR003591 -
Rops2g01495 1134 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 603 725 - -
Rops2g01495 1134 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 275 364 - -
Rops2g01495 1134 Pfam BspA type Leucine rich repeat region (6 copies) 281 385 IPR026906 -
Rops2g01495 1134 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 371 556 - -
Rops2g01495 1134 Gene3D Ribonuclease Inhibitor 38 149 IPR032675 -
Rops2g01495 1134 Pfam Brassinosteroid receptor island domain 547 605 IPR045381 -
Rops2g01495 1134 SUPERFAMILY RNI-like 241 536 - -
Rops2g01495 1134 Pfam Leucine rich repeat 604 645 IPR001611 GO:0005515
Rops2g01495 1134 Pfam Leucine rich repeat 204 262 IPR001611 GO:0005515
Rops2g01495 1134 Pfam Leucine rich repeat 129 190 IPR001611 GO:0005515
Rops2g01495 1134 Gene3D Transferase(Phosphotransferase) domain 1 913 1131 - -
Rops2g01495 1134 Gene3D Phosphorylase Kinase; domain 1 797 912 - -
Rops2g01495 1134 ProSitePatterns Protein kinases ATP-binding region signature. 843 866 IPR017441 GO:0005524
Rops2g01495 1134 SUPERFAMILY Protein kinase-like (PK-like) 818 1119 IPR011009 -
Rops2g01495 1134 FunFam serine/threonine-protein kinase BRI1-like 2 798 912 - -
Rops2g01495 1134 ProSiteProfiles Protein kinase domain profile. 837 1123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01495 1134 SMART serkin_6 837 1123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01495 1134 FunFam serine/threonine-protein kinase BRI1-like 2 913 1130 - -
Rops2g01495 1134 ProSitePatterns Serine/Threonine protein kinases active-site signature. 961 973 IPR008271 GO:0004672|GO:0006468
Rops2g01495 1134 Gene3D - 550 606 - -
Rops2g01495 1134 CDD STKc_IRAK 843 1122 - -
Rops2g01495 1134 Gene3D Ribonuclease Inhibitor 150 725 IPR032675 -
Rops2g01495 1134 SUPERFAMILY L domain-like 575 722 - -
Rops2g01495 1134 FunFam serine/threonine-protein kinase BRI1-like 2 38 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01495 Rops-Chr2 22032846 22036488 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01495 43 1122 Receptor kinase-like Gene Family AT1G55610 48.841 0.0 1008
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Rops2g01495 PK_Tyr_Ser-Thr 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01495 - - gmx:100789959 2065.81