Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01459 ATGATGACTCCAAACTTGAACTTGGAACCTGAAAATCATTCAGAAGGCAGCAGCAGTCAAGTGGCTTCCAATATATCCTTGCTAGAAGCATCCCATGATATTACCAAGGACAGTACCACTACTTCTTCCTGTCTTACCAATCTCACAAAGGCTGAAGCTGATCCAGGTTCTATTACCCTTGACTTGACACTCAACTTCAACTCCAGTGATGGTGAGTTGAAGGGTTCAAGTGATTCTAGCAGTGAAGTGGGAGCTGAAGCTCATGCTTCAGCATCAGCAACTCCCAGAGTTTTCTCTTGTAATTACTGCAGGAGGAAGTTCTATAGCTCACAGGCATTGGGGGGTCACCAGAATGCTCACAAAAGGGAGAGGACAATGGCTAAGCGCGCAATGCGAATGGGGATGTTCACTGAGAGGTATACAAGCTTGGCATCTCTACCTCTTCATGGTTCACATTTTCGGTCTCTTGGTATTGAAGCTCACGCTGCAATGCACCGAAGGCCTATGCCATCATCACTGAGGGCTCCTGATATGAGAGCTGCTGCAAAATTTGATAAAAACCATTTTGGAGCACTTGTTTTCATGGAAGAGGATGATGTTGGTTTCTTTTGGCCTGGCAGTTTCAGACAGGTGGACCAGGGAGCTGGTGTCAATGTAGGACATGCTCAAACTTCAAATGGTAGTCTTGTTCCAATGGCACCTCCTCCACCACAAGCATCTACAGCTCCAGATCTCACACTGAAGCTATAA 750 0.4613 MMTPNLNLEPENHSEGSSSQVASNISLLEASHDITKDSTTTSSCLTNLTKAEADPGSITLDLTLNFNSSDGELKGSSDSSSEVGAEAHASASATPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGMFTERYTSLASLPLHGSHFRSLGIEAHAAMHRRPMPSSLRAPDMRAAAKFDKNHFGALVFMEEDDVGFFWPGSFRQVDQGAGVNVGHAQTSNGSLVPMAPPPPQASTAPDLTLKL* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01459 249 MobiDBLite consensus disorder prediction 1 21 - -
Rops2g01459 249 MobiDBLite consensus disorder prediction 218 249 - -
Rops2g01459 249 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 13 173 IPR044246 GO:0009788
Rops2g01459 249 ProSiteProfiles Zinc finger C2H2 type domain profile. 98 125 IPR013087 -
Rops2g01459 249 ProSitePatterns Zinc finger C2H2 type domain signature. 100 120 IPR013087 -
Rops2g01459 249 FunFam Zinc finger protein 2 74 144 - -
Rops2g01459 249 SUPERFAMILY beta-beta-alpha zinc fingers 96 126 IPR036236 -
Rops2g01459 249 Gene3D Classic Zinc Finger 75 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01459 Rops-Chr2 21381270 21386064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01459 2 249 C2H2 Transcription Factor Family AT1G66140 38.971 2.02e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Rops2g01459 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01459 - - gmx:100775305 422.55