Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01451 ATGGACAAACCCCACAGTTTTCTTCATAGTATTGTGAAACACTTCAAATTTGGTTCTAATAGAGAACGAAACAATGAAGCTGACATACAGAGAATGGCTGCACAGGAACAGAAGATCTTTGCCTATGAAACCTTGCTTGCCGCCACTAAGAATTTTAGTGCTATTCATAAGCTAGGTGAAGGAGGTTTTGGACCTGTCTACAAGGGGAAGCTGAATGATGGGAGAGAAATTGCAGTGAAGAAGTTATCAGTCACCTCAAAACAAGGGAAGAAGGAATTCACCAATGAGGCCAAGTTGTTGGCTCGTGTACAGCATCGAAATGTGGTGAATTTGTTAGGTTATTGTGTCCATGGCTCGGAAAAGCTCCTTGTTTATGAGTATGTCCTTCATGAGAGCCTTGACAAACTTCTATTCAAGTCACATAAGAGAGAGGGGCTTGATTGGAACCGTAGGTTTGGCATAATCACAGGCGTGGCAAAAGGATTGCTTTATCTGCACGAAGACTCACACCATTGCATCATCCATCGTGACATAAAGGCGAGTAACATATTGCTTGATGACAAATGGACGCCCAAGATTGCAGATTTTGGCATGGCTCGTCTCTTCCCTGAAGATCAAAGCCAGATCAACACACGTGTGGCTGGAACCAATGGGTACATGGCTCCAGAGTATATGATGCATGGGAAGCTGTCTGCGAAAGCAGACGTGTTTAGCTACGGGGTTTTGGTATTGGAGTTGATCACCGGCCAACGAAATTCATCGTTTAATTTGGACGTGGATGCCATTAATCTCCTTGATTGGGTATACAAGCAGTACAAGAAAGGGAAGAGCTTAGAAATAGTAGATTCATCATTAGCATCAACAATGGTAGCAGAACAAGTAGCGATGTGCATTCAACTGGGTTTGCTATGCACACAAGGTGATCCACAACTACGTCCAACCATGAGACGTGTGGTAGTGATGCTTTCAAGGAAACCAGGGCACATGGATGAACCAACAAGACCAGGAGTACCTGGTAGCAGATATAGAAGACCTCGTAGGAACTCAACATTGTCTTTAACAGTTGGTACCTCTGGTGCTTCTGATTCACACACTTCTGATTCAAGCAACAACTATACCACTGTTACTACTACTGTAACAGGAACAAGCTCAGCTACTGTAGATGTAGACCCAAGAGGAAAACGTCCAATACAGGCTTAG 1200 0.4375 MDKPHSFLHSIVKHFKFGSNRERNNEADIQRMAAQEQKIFAYETLLAATKNFSAIHKLGEGGFGPVYKGKLNDGREIAVKKLSVTSKQGKKEFTNEAKLLARVQHRNVVNLLGYCVHGSEKLLVYEYVLHESLDKLLFKSHKREGLDWNRRFGIITGVAKGLLYLHEDSHHCIIHRDIKASNILLDDKWTPKIADFGMARLFPEDQSQINTRVAGTNGYMAPEYMMHGKLSAKADVFSYGVLVLELITGQRNSSFNLDVDAINLLDWVYKQYKKGKSLEIVDSSLASTMVAEQVAMCIQLGLLCTQGDPQLRPTMRRVVVMLSRKPGHMDEPTRPGVPGSRYRRPRRNSTLSLTVGTSGASDSHTSDSSNNYTTVTTTVTGTSSATVDVDPRGKRPIQA* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01451 399 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 21 377 - -
Rops2g01451 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Rops2g01451 399 MobiDBLite consensus disorder prediction 324 399 - -
Rops2g01451 399 ProSiteProfiles Protein kinase domain profile. 52 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01451 399 Gene3D Phosphorylase Kinase; domain 1 13 127 - -
Rops2g01451 399 SMART serkin_6 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01451 399 Pfam Protein tyrosine and serine/threonine kinase 55 321 IPR001245 GO:0004672|GO:0006468
Rops2g01451 399 Gene3D Transferase(Phosphotransferase) domain 1 129 331 - -
Rops2g01451 399 MobiDBLite consensus disorder prediction 345 387 - -
Rops2g01451 399 CDD STKc_IRAK 58 324 - -
Rops2g01451 399 SUPERFAMILY Protein kinase-like (PK-like) 37 336 IPR011009 -
Rops2g01451 399 FunFam Cysteine-rich receptor-like protein kinase 10 129 334 - -
Rops2g01451 399 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01451 Rops-Chr2 21281236 21287725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01451 40 336 Receptor kinase-like Gene Family AT4G11530 51.839 1.41e-106 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops2g01451 PK_Tyr_Ser-Thr 7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01451 - - gmx:100795769 690.649