Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01426 ATGGAGGAGGATGAGATTCAGGCACAGGCATTTAAATTTCCAAGAGTTGGAAATGGGAGAAATGAGTCTAACAAGATAGGTCCTAGAGGAGGGAATGAGGAAGAAAATGGAGAGCTGAAAAGAAGAGGTGGAGGTGGCAGTGATGTGAGCACAAACAGGTTGCATAGTTGGCATCACTCTTCTAGAATCATAAGGGTGTCTAGAGCATCTGGTGGGAAAGATAGGCACAGCAAGGTCATGACTTCAAAGGGTTTAAGAGACAGAAGGGTTAGGCTTTCTGTGACCACAGCTATTCAGTTCTATGATCTTCAAGATCGCTTGGGTTATGACCAACCTAGTAAAACTGTGGAGTGGTTAATCAAATCAGCTGCAGATGCCATTGCAGAACTACCTTCCCTTCCTGATACCCCAAAGCAACCAAGTGATGAGAAAAGGGCAAGTGAGCAAGGGTTTGATTCAGCTGATGCAGAGGTAGAAGGTGAGATCAACTATCAACAAAACCAAAACCAAAGCCAGAACCTTTCTTTGTCCAAATCTGCTTGTAGCAGCACTTCAGAGACAAGCAAAGGTTCTGGCTTGTCCCTCTCAAGGCCTGACATTCGTGTGAACCGTGTCAAGGCTAGAGAAAGAGCAAGGGAAAGAGCAGCAAAGGAGAAGGAGAAAGAGAAGGAGAATGAATCATCTCACCTTGCTCATCACCACCAACACCACATTGTGAACTCCATTTCTCAAACAGCTTCTTTCACTGAACTACTCACTGGTGGGATAAGCAATTCAGTTCCCACCACAACAAGTCCAAGAGGGTCAGTTCATCAGAATCATGGTAATGATGAGCCTAATCTGTTCAACAAAGCACCACCCATGGACTATTTCAGCTCAGGGCTTCTGGGACCTTCCTCTTCAAGAACCCATCATCATTCTTCTTCTTCTTCTTCTGGGTTCTCAGTATCACAAATCCAATTGGGACATTCCCTTCCTGAGGCTATGTCATTCAGTGAAAACCACTCATCAGATCAGCTGCAACATTTCTCTTTCATCCCTGATCATCTCATGCCACCACCACCTGTGGTTACTTCTTCTCAACCCAGCGGGAACGACTACAATCTCAACTTCACAATCTCATCCCCTCTACAACTCTTACCTGGGGCATGTTTGATCTCTAATGACATCTCAAAGGATCAGTGCCATAAAGATCAAAGGGCATGGTTTTTAGCACGAATTGCCTTAACTTTTATATTGGTTTTCTTCCCCGATTGCCTTAGCCAAATATGCATAGCTATAATTGCAACCAAGAAATGA 1299 0.4434 MEEDEIQAQAFKFPRVGNGRNESNKIGPRGGNEEENGELKRRGGGGSDVSTNRLHSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKTVEWLIKSAADAIAELPSLPDTPKQPSDEKRASEQGFDSADAEVEGEINYQQNQNQSQNLSLSKSACSSTSETSKGSGLSLSRPDIRVNRVKARERARERAAKEKEKEKENESSHLAHHHQHHIVNSISQTASFTELLTGGISNSVPTTTSPRGSVHQNHGNDEPNLFNKAPPMDYFSSGLLGPSSSRTHHHSSSSSSGFSVSQIQLGHSLPEAMSFSENHSSDQLQHFSFIPDHLMPPPPVVTSSQPSGNDYNLNFTISSPLQLLPGACLISNDISKDQCHKDQRAWFLARIALTFILVFFPDCLSQICIAIIATKK* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01426 432 MobiDBLite consensus disorder prediction 27 42 - -
Rops2g01426 432 MobiDBLite consensus disorder prediction 138 152 - -
Rops2g01426 432 MobiDBLite consensus disorder prediction 166 234 - -
Rops2g01426 432 MobiDBLite consensus disorder prediction 130 152 - -
Rops2g01426 432 ProSiteProfiles TCP domain profile. 72 130 IPR017887 -
Rops2g01426 432 Coils Coil 205 226 - -
Rops2g01426 432 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 322 IPR005333 GO:0003700
Rops2g01426 432 MobiDBLite consensus disorder prediction 1 58 - -
Rops2g01426 432 Pfam TCP family transcription factor 71 221 IPR017887 -
Rops2g01426 432 MobiDBLite consensus disorder prediction 294 314 - -
Rops2g01426 432 MobiDBLite consensus disorder prediction 257 279 - -
Rops2g01426 432 ProSiteProfiles R domain profile. 201 219 IPR017888 -
Rops2g01426 432 MobiDBLite consensus disorder prediction 166 194 - -
Rops2g01426 432 MobiDBLite consensus disorder prediction 257 314 - -
Rops2g01426 432 MobiDBLite consensus disorder prediction 201 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01426 Rops-Chr2 20670405 20675846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01426 52 376 TCP Transcription Factor Family AT4G18390 46.970 1.14e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Rops2g01426 TCP 1.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01426 - - lang:109362619 359.377