Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01422 ATGAAAATGCAGGATCCATGGTGGAATCCTACAGTTGAGGAGCAAGCAATAATGAGGATTCATCGTATAGGACAAAAGCGAAGAGTTATTGTTAGAAGATTCATCGTGAAGGACACGTTGGAAGATCGCTTTGCAACAAGTGCAAGCCAAGAAACAGAGGATGATATCCTCGGTGCCCTCACCGATGACGAGATCTACAATGAAGAAGCCAGTTTTGTATTAGGTTGGGTTCTACTAGGACTAATGGCTTCTTTATCCTTTGCGTAA 267 0.427 MKMQDPWWNPTVEEQAIMRIHRIGQKRRVIVRRFIVKDTLEDRFATSASQETEDDILGALTDDEIYNEEASFVLGWVLLGLMASLSFA* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01422 88 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 4 46 - -
Rops2g01422 88 Gene3D - 2 71 IPR027417 -
Rops2g01422 88 CDD SF2_C_SNF 5 35 - -
Rops2g01422 88 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 66 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01422 Rops-Chr2 20464263 20465159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01422 3 65 RAD5 or RAD16-like Gene Family AT5G43530 65.079 4.29e-22 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01422 K15505 - gmx:100806677 82.8037