Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01416 ATGAGCTCACGTTTGGGGTCAGGAAGCAGCAATGGGAGGACACGTGTGGGAAGATATGAAGTGGGTCGGACACTGGGTGAGGGACACTTTGCTAAGGTCAAGTTTGCAAGGAACACTGAGACAGGAGAGAATGTGGCCATCAAGATTCTCGACAAAGAAAAACTTCTCAAGCACAAGATGATAGATCAGGCAAACCACGGGAGACTGAAAGAAGATGAAGCAAGAAAATATTTTCAGCATCTTATATGTGCTGTGGATTACTGTCACAGTAGAGGTGTTTTCCATAGAGACTTAAAGCCAGAGAATTTGTTGCTGGATGCTGATGGAGTGCTTAAAGTATCAGATTTTGGATTTAGTGCACTACCTCAACAAGAAGATGGGCTGCTTCACACGGCATGTGGTACGCCAAATTATGTTGCCCCTGAGGTGATCCGTGACAAAGGCTATGATGGTGCAAAGGTTGATCTCTGGTCATGTGGTGTTATTCTTTTTGTTCTAATGGCTGGCTATTTGCCCTTCGATGATGATAACCTTATGGCTTTATATAACAAGATTTTCAAGGCTGAGTTCACTTTTCCTTCGTGGTTTTCTTCAAGTGCAAAGAAACTGGTCAAAAGAATCCTTGATCCCAAGCCTGCTACACGGATTACAATTGCTGAGGTCATTGACAGTGAGTGGTTCAAGAAGGGGTATAAGCCTCCTAGATTTTCTGAGGCCAATGTTAGTTTTGATGATGTAAATGATGTTTTCAGTGAAGCAGAGGATTCACAAAATCTTATAGTGGAGAGGCGAGAAGAAGGGCCTATAGCACCTGTGACTATGAATGCATTTGAGCTTATCTTTACATCTCAGGGCCTCAACCTTGGAAAACTTTTCGGGAAGCAGATGGGTCTTGTTAAAAGGGAAACAAGATTCACATCCAAATGTTCGGTAGATGAGATGATTTCAAAAATTGAGCAGGCTGCAGTGCCTTTGGGCTTTCATGTTAAGAAGAAGAACAATAAGTTAAAGATTCAAGGAGAAAAGACTGGACGTAAAGGTCATCTATCAATTGTCACTGAGATCTTTGAGGTGGCCCCTTCACTAAACATGGTTGAGGTTCGGAAGTCTGGAGGAGATACTCTGGAATTTCACAAGTTCTACAAGAATCTATCTAATGGGCTGAAAGATATCATTTGGAAAGCAGAGCCTATCGATGAAGAAAAAGATGGTTAG 1215 0.4222 MSSRLGSGSSNGRTRVGRYEVGRTLGEGHFAKVKFARNTETGENVAIKILDKEKLLKHKMIDQANHGRLKEDEARKYFQHLICAVDYCHSRGVFHRDLKPENLLLDADGVLKVSDFGFSALPQQEDGLLHTACGTPNYVAPEVIRDKGYDGAKVDLWSCGVILFVLMAGYLPFDDDNLMALYNKIFKAEFTFPSWFSSSAKKLVKRILDPKPATRITIAEVIDSEWFKKGYKPPRFSEANVSFDDVNDVFSEAEDSQNLIVERREEGPIAPVTMNAFELIFTSQGLNLGKLFGKQMGLVKRETRFTSKCSVDEMISKIEQAAVPLGFHVKKKNNKLKIQGEKTGRKGHLSIVTEIFEVAPSLNMVEVRKSGGDTLEFHKFYKNLSNGLKDIIWKAEPIDEEKDG* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01416 404 FunFam Non-specific serine/threonine protein kinase 268 394 - -
Rops2g01416 404 ProSiteProfiles NAF domain profile. 269 293 IPR018451 GO:0007165
Rops2g01416 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 93 105 IPR008271 GO:0004672|GO:0006468
Rops2g01416 404 CDD CIPK_C 275 390 - -
Rops2g01416 404 Pfam NAF domain 271 331 IPR004041 GO:0007165
Rops2g01416 404 Pfam Protein kinase domain 65 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01416 404 Gene3D Transferase(Phosphotransferase) domain 1 10 61 - -
Rops2g01416 404 SMART serkin_6 19 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01416 404 SUPERFAMILY Protein kinase-like (PK-like) 16 239 IPR011009 -
Rops2g01416 404 Gene3D Transferase(Phosphotransferase) domain 1 62 275 - -
Rops2g01416 404 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Rops2g01416 404 Gene3D Kinase associated domain 1, KA1 276 394 - -
Rops2g01416 404 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01416 404 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 61 - -
Rops2g01416 404 FunFam Non-specific serine/threonine protein kinase 57 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01416 Rops-Chr2 20318627 20325193 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01416 64 403 CBL-interacting serine-threonine protein kinases AT1G30270 75.731 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops2g01416 Pkinase 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01416 - - gmx:100788746 644.039