Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01394 ATGGGCTTATTTTCTCTCCTTCTAGTTATACTTCCTCTATTGACATCATTTGCGGTTTGCCAACTTGAAGAATTTGTTAGCATAGATTGTGGAGGGACAAGTAATTACACTGATAGCAGCACAGGGTTGGCATGGATTTCAGACTCTGGTATCATGCAACATGGCATTTCAGTGGAAGTTGAAAGTCCAAATGGAAGCATGGTGCAGTATCAAAGACGCAGAGACTTTCCCATAGGCAGCAAGAAACATTGTTACACACTAAGCACTGAGGAGAGAAGAAGATACCTTGTAAGAGCAACGTTTCAGTATGGAAACTTGGAAAATGGAGACACATACCCTCAGTTTCAGCTCTACTTGGACGCAACCAAATGGGCTACTGTGTCAATATATGATGCCTCAAGAATATATATTAAGGAAATGATCATCAGGGCACCCTCAAATTCTATTGATGTATGCATGTGCTGTGCTACCACTGGTTCTCCTTTCATATCTACTCTTGAGCTGAGGCCCTTGAATCTTTCAATGTATGCCACAGATTTTGAGGACAATTTCTTCTTAGAAGTAGCTGCAAGAATAAACTTTGGTGCTCCTAGTGAGGATGCTGTCAGGTATCCTGATGATCCATATGATAGAATTTGGGATTCTGATCTAATTAGAAGGCAAAATTATCTTGTTGGAGTGGCCCCAGGCACTGAAAGAATTAGCACAACAAAGAACATAGAAATAGAGACAAGAGAATATCCACCTGTAAAAGTTATGCAAACTGCAGTTGTTGGCACAAAAGGAGTACTTAGCTACAGATTAAACCTTGAAGACTTCCCTGCCAATGCTCGAGCTTATGCATATTTTGCTGAAATTGAAGATCTGGGTGAGAATGAGACTAGAAAATTCAAATTAAAGCAACCATATATACCTGACTATAGCAATGCAGTGGTTAACATTGCTGAGAATGCCAATGGGAGCTACACTCTATATGAACCAAGTTACATGAATGTAACTCTAGAATTTGTTCTGTCATTCTCCTTTGTTATGACCCCGGATTCTACTCGAGGACCTCTTCTAAATGCTCTGGAGATAAGCAAATATGTACAGATTGCTTCAAAGACTAACAGACAAGATTTAACTGTTGTAAATGCATTTGGATTCTTGTCAGCTGAAAGTTTCCAAACGAATGAAGGTGATCCTTGTGTTCCAACTCCCTGGGAATGGGTAAATTGTAGTACCACTACACCACCAAGAATTACAAAAATAATTCTTTCAAGACGGAATCTGAAGGGTGAAATCCCACCTGAGCTCAACAACATGGAAGCATTGACAGAGCTGTGGTTAGATGGCAACTTGCTCACAGGATCACTACCTGACATGAGCAACCTTATAAATCTAAAGATTGTGCATTTAGAGAACAACAAATTGACTGGTCAACTACCATCTTACCTGGGTAGTTTGCCAAGCTTACAAGCACTGTTCATACAGAATAACTCATTCAGTGGAGAAATACCAGACAGATTAGTATCTGGAAAAATCATTTTCAACTATGATGGTAATCCTGGACTATATAAAGGAAACAAGAAGCATTTTAAGTTGATACTGGGAATTTCAATTGGAGTACTAGTGCTTCTATTAGTATTATTCTTAGGAAGTTTGGTGCTATTGCACAACATGCGGAGAAAGACATCTCATCAGAAACGTGAGGAAAAAGCAGGAATTTCTGGACGAACAAACAGTAAACCTTTAACTGCATGCTCATTTGTTCGGGGTGGAAATACAATGGATGAAGGTACTACTTGCTATATTACACTCTCAGAGTTGAAAGAAGCCACTAACAATTTTTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTGTACTACGGGAAAATGAGAGATGGAAAAGAGGTGGCAGTTAAGTGTATGACTGATTCATCCAGCAATGGGAACCAGCAATTTGTTAATGAGGTAGCTCTCCTGTCAAGAATTCATCACAGAAATTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATATCAACATCTTCTGGTTTATGAGTACATGCACAATGGCACTTTACGGGATCACATTCATGAATGTTCCAAGAAGAAGAACTTGGACTGGTTAGCTCGTCTTCAAATTGCAGAAAATGCAGCTAAAGGTCTTGAATACTTACACACAGGATGTAATCCTAGTATCATTCACCGAGATGTAAAGACAAGCAATATTCTCCTAGACATCAATATGAAAGCAAAAGTGTCAGACTTTGGACTCTCTAGATTAGCTGAAGAAGATTTAACACATATATCAAGCATTGCACGTGGAACTGTAGGCTACTTGGATCCTGAGTACTATGCAAATCAACAATTGACAGAAAAGAGTGATGTGTACAGTTTTGGAGTTGTTCTGCTGGAACTGATATCCGGAAGAAAGCCTGTGTTCACAGAAGATTATGGTTCAGAAATGAACATTGTTCACTGGGCAAGGTCCTTAATTCGTAGAGGAGATGTGATGAGCATCATTGACCCTTCTTTGGTTGGTAATGTAAAAACTGAGTCCATTTGGAGGGTGGTTGAAATAGCCATGCAATGTGTACAAAAACATGGTGCCTCTAGGCCAAGGATGCAAGAAATCATTTTGGCTATACAAGATGCTATCAAGATTGAAAAGGGAACAGAAAATAAGCTGAAATCATCATCTTTAGGTAGTAGTAGTAGTTCAAAACCACATTCTTCCAGGAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGCCCTGACTTGTCAAATAGTTGCCTCCCATCAGCAAGATAA 2802 0.3915 MGLFSLLLVILPLLTSFAVCQLEEFVSIDCGGTSNYTDSSTGLAWISDSGIMQHGISVEVESPNGSMVQYQRRRDFPIGSKKHCYTLSTEERRRYLVRATFQYGNLENGDTYPQFQLYLDATKWATVSIYDASRIYIKEMIIRAPSNSIDVCMCCATTGSPFISTLELRPLNLSMYATDFEDNFFLEVAARINFGAPSEDAVRYPDDPYDRIWDSDLIRRQNYLVGVAPGTERISTTKNIEIETREYPPVKVMQTAVVGTKGVLSYRLNLEDFPANARAYAYFAEIEDLGENETRKFKLKQPYIPDYSNAVVNIAENANGSYTLYEPSYMNVTLEFVLSFSFVMTPDSTRGPLLNALEISKYVQIASKTNRQDLTVVNAFGFLSAESFQTNEGDPCVPTPWEWVNCSTTTPPRITKIILSRRNLKGEIPPELNNMEALTELWLDGNLLTGSLPDMSNLINLKIVHLENNKLTGQLPSYLGSLPSLQALFIQNNSFSGEIPDRLVSGKIIFNYDGNPGLYKGNKKHFKLILGISIGVLVLLLVLFLGSLVLLHNMRRKTSHQKREEKAGISGRTNSKPLTACSFVRGGNTMDEGTTCYITLSELKEATNNFSKKIGKGSFGSVYYGKMRDGKEVAVKCMTDSSSNGNQQFVNEVALLSRIHHRNLVPLIGYCEEEYQHLLVYEYMHNGTLRDHIHECSKKKNLDWLARLQIAENAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMKAKVSDFGLSRLAEEDLTHISSIARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGRKPVFTEDYGSEMNIVHWARSLIRRGDVMSIIDPSLVGNVKTESIWRVVEIAMQCVQKHGASRPRMQEIILAIQDAIKIEKGTENKLKSSSLGSSSSSKPHSSRKTLLTSFLEIESPDLSNSCLPSAR* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01394 933 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 684 891 - -
Rops2g01394 933 Gene3D Transferase(Phosphotransferase) domain 1 684 900 - -
Rops2g01394 933 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Rops2g01394 933 PANTHER OS07G0107800 PROTEIN-RELATED 454 882 - -
Rops2g01394 933 FunFam receptor-like serine/threonine-protein kinase NCRK 587 683 - -
Rops2g01394 933 SUPERFAMILY L domain-like 397 503 - -
Rops2g01394 933 Pfam Protein tyrosine and serine/threonine kinase 610 875 IPR001245 GO:0004672|GO:0006468
Rops2g01394 933 SUPERFAMILY Protein kinase-like (PK-like) 594 875 IPR011009 -
Rops2g01394 933 ProSitePatterns Protein kinases ATP-binding region signature. 614 636 IPR017441 GO:0005524
Rops2g01394 933 Gene3D Phosphorylase Kinase; domain 1 586 683 - -
Rops2g01394 933 Gene3D Ribonuclease Inhibitor 371 511 IPR032675 -
Rops2g01394 933 SMART serkin_6 608 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01394 933 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 408 499 - -
Rops2g01394 933 ProSiteProfiles Protein kinase domain profile. 608 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01394 933 CDD STKc_IRAK 614 875 - -
Rops2g01394 933 Pfam Malectin-like domain 28 361 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01394 Rops-Chr2 19894919 19900340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01394 1 933 Receptor kinase-like Gene Family AT1G67720 68.517 0.0 1285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Rops2g01394 Malectin_like 1.4e-90 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01394 - - gmx:100790944 1610.51