Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01392 ATGGAAATGGAATTAATTTCAAGAGAAACCATCAAACCCTCAACACCCACTCCTCCTCACCTCAGAATTTATCCCCTCTCTTTCATAGATCACATCGTTTTCCGTAATTATGTGCCATCACTTTTCTTTTACCACCCAAACCATGTCTGTGACCAAAGATCCAAAATATCAAAGCTCAAGAAATCCTTATCTCAAGTTCTATCCAGATACTACCCCTTTGTAGGCAGATTCAGAGATCAACTTTCCATTGAATGTAACGATCAAGGGGTGTCATTTCTGGTCGCAAGGATCATAGGTACAAAGCTATCAACAATCCTCCAGAATCCAAGCGAAACATTATTGAACCCTTTGTTCCCTGATGAATTGCAATGGAAAGATATGATGAGTTGTTCAAGTGCAAGTATATTAGCCATTCAAATAAACTCTTTTGCATGTGAGGGAATGGCTATTAGTGTGTGTATGTCTCACAAAGTTGGCGATGCTGCCACCCTTTTCAACTTCGTTAATGATTGGGCCACCATGAACAGAGAAGAAGAAAAAGAGTTACCCTTCTTCCCTTTGCTTAATGGAGGAACTTCAGTGTTCCCACAAGGGGACTTGCCTGTTTTCCCTGAAGTTGTGTTTGTGAAAGACAAAACGGTGTGTAGAAGGTTTGTGTTTCAAGCATCGAAGATAGAGTCCCTCAAAGCCATGGTTTCTTCCAATTGCAAGGCCACGCGCGTGGAAATTGTCACTGCATGGATTTACAAGCGTGCGGTTTCTGCTTTGGGATTATCATTCAAAACAACGTCGTTTCGCATTGCTGTCAACCTCCGCAGAAGAATGGTTCCTCCATTGCCTGACTCGTGTGTAGGGAACATGGTTTGGTTCTTGTTCGTTCTCAACCCGTTATTGGAACTACATGATTTGGTAAGCAAAATGAAAGAAGGGTTATCTGAGTTTTGTGACATATATGCTGAAAAATTTGGAGGGAATAAGGACTTGTCATTCATCTCTGAGTGCTTGAAACAAGCTACTTCAGCTCCGGAGCCTAGTGGTTCTTCTGATAAGGAGAATGAAACTTTGTTTTGCTATGCTAGTTGGTGCTGGTTCCCAATGTATGAAGCAGATTTTGGGTGGGGCAAACCGATATGGGTGACTACTAGTGGGTGCCCCGTGAGGAATAGCATAGTTTTGATGGATACAAGAGATGGGGAGGGGATTGAAGCGGTTGTGAACATGGAAGAGCAAGACATGGCTAGGTTTGAGTGTGATGTGGAGCTCCTAAAATATGCTTCTCTTAATCCAAACCGTTGGACATGA 1302 0.4255 MEMELISRETIKPSTPTPPHLRIYPLSFIDHIVFRNYVPSLFFYHPNHVCDQRSKISKLKKSLSQVLSRYYPFVGRFRDQLSIECNDQGVSFLVARIIGTKLSTILQNPSETLLNPLFPDELQWKDMMSCSSASILAIQINSFACEGMAISVCMSHKVGDAATLFNFVNDWATMNREEEKELPFFPLLNGGTSVFPQGDLPVFPEVVFVKDKTVCRRFVFQASKIESLKAMVSSNCKATRVEIVTAWIYKRAVSALGLSFKTTSFRIAVNLRRRMVPPLPDSCVGNMVWFLFVLNPLLELHDLVSKMKEGLSEFCDIYAEKFGGNKDLSFISECLKQATSAPEPSGSSDKENETLFCYASWCWFPMYEADFGWGKPIWVTTSGCPVRNSIVLMDTRDGEGIEAVVNMEEQDMARFECDVELLKYASLNPNRWT* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01392 433 Gene3D - 1 201 IPR023213 -
Rops2g01392 433 Gene3D - 210 425 IPR023213 -
Rops2g01392 433 Pfam Transferase family 2 421 - -
Rops2g01392 433 PANTHER F21J9.9 4 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01392 Rops-Chr2 19858949 19860250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01392 1 416 Monolignol Biosynthesis Gene Families AT5G48930 25.112 5.80e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01392 - - gmx:100806928 609.757