Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01391 ATGGAAATTGAATTAATATCCAGAGAAACCATCAAACCCTCTGAACCCACCCCTCCTAACCTCACTATCTATCCTCTCTCCTTGATAGATAATATCGTTCCTCCAAATTCTGTGCCACTAGTTTACTTTTACCCAAACCAAAGGTGTGAATATGATACTGATGATGCTTGTGACCAAGGATCCAAAATATTGATGCTAAAGAAGTCATTATCTAAGGTTCTATCCATATACTACCATCTTGCTGGTAGGTTAAAAGATAATCGTTCCATTGACTGCAATGACCAAGGGGTATCCTTGCTGGTCACAAGGATCAAATGCAAGCTATCAACAGTTGTTAAGAACCCTAGTGAAGAATTGGTGAACTCTTTATTCCCTGATGAATTGCAGTGGGAGGATATGGGTTCAAGTGCGTGTTTAGTGGCCATTCAAATCAACGGTTTTGCTTGTGGGGGAATGGCAATCAGTGTGTGTATGTCTCATAAGGTTGGCGATGTTTCCGTTCTTTTCAACTTCATCAATGACTGGGCACTTTTGAACAGAGAGTATTGTGATGATGAAGAAGGAGAATCAATAACCTTCCCCATGTTTGATGAAATAGGTTCTCCGTTCCCACGAGGGGACTTGCCAGTTTTACCACAATTGGTGCTTGTGAAACACAACAACACAGTTTGCAGACGGCTTGTGTTTCAAGGGTCGAAGATTGAGTCCCTCAAAGCTATGGTATCATCCCACAAAGTTGAAAATCCCACGCGCGTGGAAGTTGTCATTGCATTGATTTACAAGTGTGCTGTTTCTGCGTTGGGATTAGCCGCTAACAACACTCCTTTGCGTGTTACTGTCAACCTCCGCAAAAGAATGGCTCCTCCACTACCTAACAAGTCCTTAGGAAACTTGGTTTCGAGCTTTTACGCATCTTCGTGCATGGATAACAGGGAACCAGAATTACATGATTTGGTTAGCAAAACAAGAGAAGGGTTATCTGAATTTTGTGATAAATATGTTACAAATTTCAGGGATTTGTCATTCGCCTACGAGTTCCTAAAACAAGTTGCTTCTTTACCTTCTGTGTCCCTTGATCAGGAGACGAAGCGAACTTTATTTTTTTTTGCCAGCTGGTGCAGGTTTCGGACCTACGAAGCGGATTTCGGGTGGGGCAAGCCAATATGGGTCACCACTAGTGGTTGTCCCGTGAGGAATAGCATAGTTTTGATGGATACAAGAGACGGAGATGGGATTGAAGCGGTTGTGAACATGGAAGAGCAAGACATGGCTAGGTTTGAGTGTGATGTGGAGCTCCTAAAATATGCCTCTCTTAATCCAAACGGTTGGGCAAGCTAA 1338 0.4283 MEIELISRETIKPSEPTPPNLTIYPLSLIDNIVPPNSVPLVYFYPNQRCEYDTDDACDQGSKILMLKKSLSKVLSIYYHLAGRLKDNRSIDCNDQGVSLLVTRIKCKLSTVVKNPSEELVNSLFPDELQWEDMGSSACLVAIQINGFACGGMAISVCMSHKVGDVSVLFNFINDWALLNREYCDDEEGESITFPMFDEIGSPFPRGDLPVLPQLVLVKHNNTVCRRLVFQGSKIESLKAMVSSHKVENPTRVEVVIALIYKCAVSALGLAANNTPLRVTVNLRKRMAPPLPNKSLGNLVSSFYASSCMDNREPELHDLVSKTREGLSEFCDKYVTNFRDLSFAYEFLKQVASLPSVSLDQETKRTLFFFASWCRFRTYEADFGWGKPIWVTTSGCPVRNSIVLMDTRDGDGIEAVVNMEEQDMARFECDVELLKYASLNPNGWAS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01391 445 PANTHER F21J9.9 4 437 - -
Rops2g01391 445 Gene3D - 1 209 IPR023213 -
Rops2g01391 445 Pfam Transferase family 1 432 - -
Rops2g01391 445 Gene3D - 219 436 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01391 Rops-Chr2 19835634 19837122 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01391 1 427 Monolignol Biosynthesis Gene Families AT5G48930 24.890 7.49e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01391 - - gmx:100806928 493.041