Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01389 ATGACCATGGAAATGGAATTAGTATCAAGAGAATTCATCAAACCCTCTACACCTACGCCTCCTCACCACAAAATTCATCCTCTCTCTTTCATAGACCATATCGTTGCACGTAATTACGTGCCATTAGTTTACTTTTACCCAAACGAGGGCTCTGAATATGATAATAACCAAGGATCCAAAATATCAATGCTCAAGAAATCCTTATCTGAAGTTCTATCCATATACTACCCATTTGCTGGTAGGCTCAGAGATCAAGTTTCCATTGATTGCAACGACCAAGGTGTGTCATTGCTTGTCACAATGATCAGAAGCAAGCTATCAAAGATCCTCCAGAACCCCACGGAAGCTTTGCTGAACCCTTTGTTCCCTGATGAATTACAATGGAGGGTCACGGATTCAAGTGAAAGTATAGTAGCCATTCAAATAAACTGTTTTGCATGTGGGGGAATAGCTATCAGTGTGTGCATGTCTCACAAAGTTTGTGATGGTCCAACTCTCTTTAACTTCGTTAATGACTGGGCCATCATGAATAGAAAGTGTAGTGGTGAAGAAGGAGAGTTACACTTTCCAGTTCTTGATGCAGGAGCTTCACTATTCCCACAAGGGGATTTACCAGTTTTCCCAGAATTTGTGTTTGCAAAACAAAACACGGTATGCAGAAGGTTTGTGTTTGAGGGGTCGAAGATTGAGTCCCTCAAAGCCATGGTATCATCCCATAAAGTGGAAAACCCCTCGAGTGAAGAAGTTGTAATTGCACTGATTTACAAGCGTGCAGTTTCTGCATTGAGATTGGCCAACAACACACCTTTGAGAGTTTCTGCCAACCTCCGCAGAAGAATGGTTCCTCCACTGCCTGACAAGTCCATAGGAAACTGGTTTTGGAATTTTCCAGTATCCAGGGACAAAGGGGAAGTAGAATTGCAGGACTTGGTAATCAAAATGAGAGAAGGGTTATCTGAGTTTTGTGACAAAACTGTGAAAAACTTGAGGGACTTTTCCTTTGTATGTGAGTTCCTAAAACAAGCTACTTCTTTTCCAAAACGAAAGGAAGCTACTTCAAATGCTTCTAACCACCAGGTGAAGCCAGCTTTGTTTTTCTTTGCAAGCTGGTGTAGGCTCCCAACATACGAAGTGGATTTCGGTTGGGGTAAGCCAATATGGGTTACCAGTGTTTGTTCTCCTGTGAGGAATTGTATAGTTTTGATGGATACAAAAGCTGGGAATGGGATTGAAGTGCTTGTGAATATGGAAGAGCAAGATTTGGTCATATTTGAACGTGATGTGGAACTCCTTCAATATGCATCTCTTAATCCAACCGTTTAG 1323 0.4172 MTMEMELVSREFIKPSTPTPPHHKIHPLSFIDHIVARNYVPLVYFYPNEGSEYDNNQGSKISMLKKSLSEVLSIYYPFAGRLRDQVSIDCNDQGVSLLVTMIRSKLSKILQNPTEALLNPLFPDELQWRVTDSSESIVAIQINCFACGGIAISVCMSHKVCDGPTLFNFVNDWAIMNRKCSGEEGELHFPVLDAGASLFPQGDLPVFPEFVFAKQNTVCRRFVFEGSKIESLKAMVSSHKVENPSSEEVVIALIYKRAVSALRLANNTPLRVSANLRRRMVPPLPDKSIGNWFWNFPVSRDKGEVELQDLVIKMREGLSEFCDKTVKNLRDFSFVCEFLKQATSFPKRKEATSNASNHQVKPALFFFASWCRLPTYEVDFGWGKPIWVTSVCSPVRNCIVLMDTKAGNGIEVLVNMEEQDLVIFERDVELLQYASLNPTV* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01389 440 Gene3D - 214 435 IPR023213 -
Rops2g01389 440 Gene3D - 1 205 IPR023213 -
Rops2g01389 440 PANTHER F21J9.9 6 435 - -
Rops2g01389 440 Pfam Transferase family 4 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01389 Rops-Chr2 19822317 19823639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01389 3 426 Monolignol Biosynthesis Gene Families AT5G48930 24.229 3.88e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01389 - - gmx:100806928 519.235