Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01354 ATGAAGCCCACGGCAACATTCCTCTCTCTCCTAATCCCAACAACACTTGTTTGTCTTGGTCTTGGAGCAACAACACTCCAAAGCACCCTCTCATCTTGTTCTTGGCCACTTGGCACTCTCTTTATCTCCACGTTCCTCACCCTCCTCGCTATTTCCTCAAACTACTGGCTTGTCCCTGGAGGCTTTGCATGGAGGAACTATCACAACCATTGCGAAAAACAAAACACAAAACTCAAACTCACTGGTCCTATGGGATGGCCCATACTTGGGACTTTACCTCATATGGGTTCTCTGGCTCATTCAAAACTCGCTGCCATAGCCACTTCCTTAAAAGCAAAAAGGTTAATGGCGCTGAGTCTAGGAGCCACCCCTGTTGTCATAAGCAGCCACCCTGAAACTGCTAGAGAAATTCTCTTTGGTTCATCGTTTTCTGATCGTCCAATCAAAGAATCAGCACGCATGCTCATGTTTGAGCGTGCCATTGGTTTTGCTCCCTCTGGAACCTATTGGCGACACCTACGTAGGATCGCAGCCTTCCACATGTTTTCTCCGAGGAGGATTCTCGGTTTGGAGAGTCTCCGGCAACGTGTGGCTGATGAAATGATGATGAGAACATGGAAGGAGATGGAGGAGAAAAGGGTAGTGGACATTCGAGGTATATTGCAACAAGGGTCTCTCACCAATATTTTGGAGAGTGTGTTTGGTACCAATTGTTGTTCAGAAAGGGATGAGTTGGGCAATATGGTTAAGGAAGGGTATGAGTTAATTTGTAAGTTTAACTTGGAAGATTATTTTCCTTTGAAATTTTTGGACTTTCATGGGGTGAAGAGAAGGTGTCATAAATTGGCGGCTAAGGTCACTAGTGTGGTGGGTCAAATTGTTGAAGAACGAAAAAGAACTAAGGAGTTCGTTGGGCAGAATGATTTTCTTAGCACTTTGCTATCCTTGCCCAAAGAGGAAAGGTTGAGTGATTCAGATATGGTTGCCATTCTATGGGAAATGATATTTCGAGGAACAGACACAGTTGCTATACTCCTGGAATGGATCATGGCGAGGATTGTTTTACACCAAGACATACAAATGAAAGCCCGCCAAGAGATTGACAAGTGCATCGGCCAAAACAGTCACGTGCGAGACTCAGACATTCCCAAACTCCCTTACCTCCAGGCCATAGTAAAGGAGGTTCTCAGACTGCATCCACCAGGCCCATTACTATCATGGGCCCGCCTCGCAGTCCATGACGTCCACGTAGATAAGGTCTTCGTGCCAGCTGGCACAACAGCAATGGTTAACATGTGGGCCATATCTCATGACTCGTCTATCTGGGAGGACCCATGGGCTTTCAAGCCCGAGAGGTTCCTTAAAGAAGACGTGTCTATCATGGGCTCCGACTTGAGGCTTGCACCATTCGGAGCAGGACGTAGGGTATGCCCGGGTAGAGCCTTGGGCTTAGCCACGGTCCATCTCTGGCTCGCACAACTTCTCCACAAGTTCATATGGCTACCGGCACAACCTGTGGATCTTTCAGAATGCCTTAGGCTTTCTCTCGAAATGAAGACACCTCTGCGATGTGTAGTGGTTCGGAGATAA 1590 0.473 MKPTATFLSLLIPTTLVCLGLGATTLQSTLSSCSWPLGTLFISTFLTLLAISSNYWLVPGGFAWRNYHNHCEKQNTKLKLTGPMGWPILGTLPHMGSLAHSKLAAIATSLKAKRLMALSLGATPVVISSHPETAREILFGSSFSDRPIKESARMLMFERAIGFAPSGTYWRHLRRIAAFHMFSPRRILGLESLRQRVADEMMMRTWKEMEEKRVVDIRGILQQGSLTNILESVFGTNCCSERDELGNMVKEGYELICKFNLEDYFPLKFLDFHGVKRRCHKLAAKVTSVVGQIVEERKRTKEFVGQNDFLSTLLSLPKEERLSDSDMVAILWEMIFRGTDTVAILLEWIMARIVLHQDIQMKARQEIDKCIGQNSHVRDSDIPKLPYLQAIVKEVLRLHPPGPLLSWARLAVHDVHVDKVFVPAGTTAMVNMWAISHDSSIWEDPWAFKPERFLKEDVSIMGSDLRLAPFGAGRRVCPGRALGLATVHLWLAQLLHKFIWLPAQPVDLSECLRLSLEMKTPLRCVVVRR* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01354 529 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01354 529 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01354 529 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01354 529 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01354 529 PRINTS E-class P450 group I signature 109 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01354 529 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01354 529 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01354 529 Pfam Cytochrome P450 82 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01354 529 SUPERFAMILY Cytochrome P450 82 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01354 529 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01354 529 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01354 529 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01354 529 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops2g01354 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Rops2g01354 529 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Rops2g01354 529 CDD CYP78 111 522 - -
Rops2g01354 529 FunFam Cytochrome P450 78A5 72 529 - -
Rops2g01354 529 PANTHER CYTOCHROME P450 78A7-RELATED 37 529 - -
Rops2g01354 529 Gene3D Cytochrome P450 67 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01354 Rops-Chr2 19364915 19367436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01354 40 529 Cytochrome P450 AT1G74110 51.838 1.74e-177 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01354 - - gmx:100817944 854.744