Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01335 ATGGAATTTGTTCGACCTCACAGTCACAGGAATTCATTGTCCTCCTTCAACGACGCCGTTTCCCTTCCCCTCTATCGCTCTGCTCCGCCACTCGAAGTCAGGCTCGAGGATTTCGAGTCCTTCGCCATCGATCGCCTCCGAGTTCTCAAGGGGCTTTCTGATGGTTTGTCACGGGGAAAGAAACCGGAAGAAATTAAAAAATTGGTAAAAGACCTGTGGGAAATGCATATGAGACATCAACATACTTCTGAGGTTCTGAACAAGGATATTATATCTCATTTTGTTCTACGTCTGGTGTATTGCAGAACGGAGGACCTGAGGAAATGGTTTCTTTCTATGGAATCTTCACTCTTTCGCTATCGTTTTCATCGTCTAAGTGCTGAAGCTCAGAAAGCAATCATGGAAGAATTTGACCTTCCTTACAGAGCCGTCAGCCATATGGAATTCGAGAGCATAAAAGAAAAATTGGGACAGGTTGCACGTTCAATGGGTCTGCCTTTACCCACTGCTGATGCTATCTTCTACAAGGTACCGTTTGAAGAAGTCCCAGAGCTTGTAGCTGGACGAAAAGTGTTTATAAATCAAGGATATGCCTATGTTGCAATGAATCAGGTCGTTTCACTTGTAGCCACACTATTCCGAAGTCAGCTGTCAAAGGCACTCATCCTTACAAACAGAAAATGGACATCTTCAATCAGAGAACAAGAGAAACATAGGCTGACTCCTATTGTGGAAGCCCTGTGCTCAAGTTATCTGGGTCCTGATTTTTCTCAGCCAAGAGAATATGCTGAGATATCATTAAAGGACATTGAGCAAGTTGCCAAGAGCTCTTTTCCTTTGTGCATGCGTCACCTATTTGATAAGCTGAGAGAGGATCATCATTTAAAGCATGGAGGGAGGATGCAACTAGGCCTCTTTCTCAAGGGTGTTGGCTTGAACCTGGATGATGCACTTGCGTTTTGGAGATCTGAGTTCTCTAAAAAGGTTGGCTTGGAGAAGTTTGAGAAAGAATATGCTTATAACATACGCCATAATTATGGAAAGGAAGGGAAAAGAACTGATTATACACCCTATTCTTGTCAAAAGATTATTTCATCAACTCCTGGTGCTGGAGATCAGCACGGTTGCCCCTATCGACATTTCAGTGAAGAGAATCTAAGAGCTGCTCTCAGCAGAATGGGGGTAAATAGTCGAGCAATGGAAGATGTGATAGACAAAGTGAGAAATAGACATTATCAGTTAGCTTGCACCCTGACATTTGAAGCTCTTCATGGCATGCCATGTGATGCTGGGATTAATCATCCAAATCAATACTTCAGTGACAGTCAAAAGATATTGCAATCAAAGAAGGATTCTTCAGCCTAA 1365 0.4293 MEFVRPHSHRNSLSSFNDAVSLPLYRSAPPLEVRLEDFESFAIDRLRVLKGLSDGLSRGKKPEEIKKLVKDLWEMHMRHQHTSEVLNKDIISHFVLRLVYCRTEDLRKWFLSMESSLFRYRFHRLSAEAQKAIMEEFDLPYRAVSHMEFESIKEKLGQVARSMGLPLPTADAIFYKVPFEEVPELVAGRKVFINQGYAYVAMNQVVSLVATLFRSQLSKALILTNRKWTSSIREQEKHRLTPIVEALCSSYLGPDFSQPREYAEISLKDIEQVAKSSFPLCMRHLFDKLREDHHLKHGGRMQLGLFLKGVGLNLDDALAFWRSEFSKKVGLEKFEKEYAYNIRHNYGKEGKRTDYTPYSCQKIISSTPGAGDQHGCPYRHFSEENLRAALSRMGVNSRAMEDVIDKVRNRHYQLACTLTFEALHGMPCDAGINHPNQYFSDSQKILQSKKDSSA* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01335 454 CDD PriL_PriS_Eukaryotic 24 442 IPR016558 -
Rops2g01335 454 Gene3D - 4 247 - -
Rops2g01335 454 PIRSF DNA_primase_large 4 454 IPR016558 -
Rops2g01335 454 Pfam Eukaryotic and archaeal DNA primase, large subunit 174 439 IPR007238 GO:0006269
Rops2g01335 454 FunFam DNA primase large subunit 6 247 - -
Rops2g01335 454 PANTHER DNA PRIMASE LARGE SUBUNIT 18 450 IPR007238 GO:0006269
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01335 1 453 Core DNA Replication Machinery Family AT1G67320 66.057 0.0 663
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01335 K02685 - gmx:100806321 823.542