Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01304 ATGCAATCCTTAAAGTTACACCCTGCTCTTTTATGTTCTCTTTTGAATCACTTTTCTTCTAACTCTGCCAGATCCTTTCTCTATTCATTCTCCACTGGTTGTTCTTTATCAACCCAAGGCCAATACTCAAAGGAAAGCACTTCCATAATTGATTACCTAAATGCCAATTTCAAATTCTCAAAAGCTCAATCCATCTATATCTCAAAACATGCTTCAGGGGTCAGCTTCCCTCAAAAGCCCTTGTCCATGTTGAATTTTTTCAGACAAATTGGATTTTCTGAAGCCCAGATTCAGTCTATGATTCGTCAGAAACCTCAAATACTGTTTTCAGATGTTGAGAAAACCCTGAGACCAAAAATTGAGCTCTTTCAACTATTGGGTTTCGAGGGTTCTGAGTTATGCAAGTTTGTTTCCAACAATCCAACCATTTTGACTTCTAGTTTGAACAAAGCATTGGTCCCCTCTGTGGAAGCTATTAGGAAAATCGTGTGCAATGACAAAGATTTTATTCAAGTTTTGCGCAGATGTGGCTGGATACTCCCAAAGTACCAAAAATTGATGGACAACATTACTTTCTTAGAGAGTTGTGGCATTGTTGGGTCTCAGCTTTCAATGCTACTCAAAAGACAGCCAAGGATTTTCATTGCACCACAGTCTACTATTAGAAAACATGTTTCGAATGCTGTAGACATGGGTTTCCATGAAAATTCAGGAATGTTGGTCCATGCGCTCCATACGATAACCGGTTTGAGCTCTAAGACATTTAGGAGAAAACTGGAGCTAATTCAGTGTTTTGGGTTTTCTAGAGATGAGAGCATGCAAATGTTCAAAAAGTGCCCATCTTTGCTTAGAACATCAGAGAAGAAATTGAAGGTTGGAATGGAATTCTTCTTGCAAACAGTTATGCTGCCAAAGTCAGTCTTGGTTCATCGGCCTATGATTTTAATGTATAGCATCGAGGATCGGATGCTTCCTCGATATAGAGTTTTGCAGCTCTTAATATCAAAAAATCTATGTAAGAAGGTCCCGAGTTATATGTATGTGTTATGTTTGTCTGAGGAGATGTTCTTGGACAAGTATATATCACGGTTTAGAGAAAATGCTGAGGAATTATTGGTAGCTTACAAGGGTCATCTTCTGGATGTGTAA 1149 0.3856 MQSLKLHPALLCSLLNHFSSNSARSFLYSFSTGCSLSTQGQYSKESTSIIDYLNANFKFSKAQSIYISKHASGVSFPQKPLSMLNFFRQIGFSEAQIQSMIRQKPQILFSDVEKTLRPKIELFQLLGFEGSELCKFVSNNPTILTSSLNKALVPSVEAIRKIVCNDKDFIQVLRRCGWILPKYQKLMDNITFLESCGIVGSQLSMLLKRQPRIFIAPQSTIRKHVSNAVDMGFHENSGMLVHALHTITGLSSKTFRRKLELIQCFGFSRDESMQMFKKCPSLLRTSEKKLKVGMEFFLQTVMLPKSVLVHRPMILMYSIEDRMLPRYRVLQLLISKNLCKKVPSYMYVLCLSEEMFLDKYISRFRENAEELLVAYKGHLLDV* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01304 382 Gene3D Transcription termination factor 3, mitochondrial 162 368 IPR038538 -
Rops2g01304 382 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Rops2g01304 382 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Rops2g01304 382 SMART mt_12 204 234 IPR003690 GO:0003690|GO:0006355
Rops2g01304 382 SMART mt_12 170 199 IPR003690 GO:0003690|GO:0006355
Rops2g01304 382 SMART mt_12 305 337 IPR003690 GO:0003690|GO:0006355
Rops2g01304 382 SMART mt_12 238 268 IPR003690 GO:0003690|GO:0006355
Rops2g01304 382 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Rops2g01304 382 PANTHER CGI-12 PROTEIN-RELATED 45 363 IPR003690 GO:0003690|GO:0006355
Rops2g01304 382 Pfam mTERF 84 176 IPR003690 GO:0003690|GO:0006355
Rops2g01304 382 Pfam mTERF 184 356 IPR003690 GO:0003690|GO:0006355
Rops2g01304 382 FunFam Mitochondrial transcription termination factor-like 148 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01304 Rops-Chr2 18700663 18702978 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Rops2g01304 mTERF 6.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01304 K15032 - jre:108985778 361.688