Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01241 ATGAATATGTTGGATTTCCAAGTCGTCGTTCTCGGCGGTGGCGAATCCAAGAAACTCCACCCCCTCGTATCAAAGGAGCTTCCAAACGCTTTACTTCCGGTGGCGAATCGCCCAGTTCTCTCTTACGTTCTCGAGTTCTTGGAACTTAGCAACCTTAAAGATCTCATTGTGGTAGTTGAAGGTGAAGATGCGGCTCTTAATGTTGGGGCTTGGATTTCAGGGGCTTATGCTGATCGCCTTCATGTTGAGGTTGCTGCAGTTCCTGAGGATGTGGGAACAGCTGGTGCAATTCGGGCCATTGCACACCACCTAACTGCGAAAGACATTTTGGTTGTTAGTGGTGATCTTGTTTCTGATGTGCCAATTGGTGCCGTTGCAGCTACTCATAGACGACAAGATGCAGTTGTCACTGCCATGCTTTGCTCTGCTCCTGCAAGTGGACATTCAGAATCAGTATCCTCTGGTGGGAAAGACAAAACCAAGAAACCTGGTCGCTATGATTTAATAGGGCTGGACCCCACAAAACAGTTTTTACTTCATATAGAAACTGGAGCTGAAGTTGAAAAAGATCTCCGGATTTGGAAGAGCATGCAACGTGCAGTTGGCCAGATAGAAATCAGAGCTGATCTAATGGATGCCCACTTGTATGCATTCAAAAGATCAGTTCTACTAGAAGTTCTAGATCAGAAGGGTGCATTTCATAGCTTAAAGCATGATGTATTGCCATATCTTGTCCGGAGCCAACTGAAATCAGAAGTATTATTAAATGGTATCCCACAAGCAGAAGAAAATGGAACTGAGAAGGTTATTTCTCAAAGCAATCAACAAATGCTATCTCAAATACTTGCTAATGCATCTGAACTGACCTTTCATCAACGACATGCACTGTGTCCTTATGGTTTTACTTCTGATCGAAGAACCCATAAATGCTGTGTTTATTTTGCTGGAAGCAACAACTACTGTGCTCGCCTAAATTCTATTCAAGCATACAGTGACATAAACCGAGATGTGATAGGTGAAGCTAGGCATTTGTCAGGGTATTCCTTCTCTGCTCAAAACAACATTATCCATCCTTATGCAGAGCTTGGGGCAAAAACGACTGTAGGACCACATTGTATGCTGGGGGAAGGTTCACAGATGGGTGACAAATGCGGTGTGAAACGGTCTGTCATTGGGCGTCACTGTAGGATAGGTGCCAATGTTAAGATTGTTAATTCAGTAGTTATGAATCATGTTACTATTGGAGACGGTTGTTCAATTCAAGGTTCTGTCATCTGCAGCAATGTACAGCTCCAAGAACATGCTGTACTGAAAGATTGTCAAGTTGGAGCAGGATTTGTGGTCACTGCTGGTAGTGAATGCAAAGGGGAGGTCTTGGCTAAGAAATGA 1389 0.4384 MNMLDFQVVVLGGGESKKLHPLVSKELPNALLPVANRPVLSYVLEFLELSNLKDLIVVVEGEDAALNVGAWISGAYADRLHVEVAAVPEDVGTAGAIRAIAHHLTAKDILVVSGDLVSDVPIGAVAATHRRQDAVVTAMLCSAPASGHSESVSSGGKDKTKKPGRYDLIGLDPTKQFLLHIETGAEVEKDLRIWKSMQRAVGQIEIRADLMDAHLYAFKRSVLLEVLDQKGAFHSLKHDVLPYLVRSQLKSEVLLNGIPQAEENGTEKVISQSNQQMLSQILANASELTFHQRHALCPYGFTSDRRTHKCCVYFAGSNNYCARLNSIQAYSDINRDVIGEARHLSGYSFSAQNNIIHPYAELGAKTTVGPHCMLGEGSQMGDKCGVKRSVIGRHCRIGANVKIVNSVVMNHVTIGDGCSIQGSVICSNVQLQEHAVLKDCQVGAGFVVTAGSECKGEVLAKK* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01241 462 Pfam Nucleotidyl transferase 9 142 IPR005835 GO:0009058
Rops2g01241 462 CDD eIF-2B_gamma_N 6 223 - -
Rops2g01241 462 Gene3D Hexapeptide repeat proteins 354 459 - -
Rops2g01241 462 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 353 IPR029044 -
Rops2g01241 462 MobiDBLite consensus disorder prediction 145 165 - -
Rops2g01241 462 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 3 462 - -
Rops2g01241 462 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 428 IPR029044 -
Rops2g01241 462 CDD LbH_eIF2B_gamma_C 373 453 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01241 291 453 Eukaryotic Initiation Factors Gene Family AT4G18300 28.333 3.54e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01241 K03241 - gmx:100799460 815.068