Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01221 ATGGCAACTTTAGTTGAGCCTCCCAACAGAATTAAGCCAAAAGGGAAGCATTATTATACAATATGGCAAACATTGTTTGAGATTGATATAAAGTATGTTCCAATCAAGCCAATTGGCCGAGGAGCATATGGCGTGGTGTGCTCTTCCATCAATAGGGAGACCAATGAGAAAGTTGCAATTAAGAAGATTGGTAATATATTTGAGAATTGTATTGATGCATTGAGAACTTTAAGGGAGCTGAAGCTGCTGAGACACATTCGGCATGAGAATGTGATTGCTTTGAAAGATGTTATGATGCCAATCCATAGAACAAGTTTTAAGGATGTCTACTTGGTCTATGAACTCATGGATACAGATCTTCATCAGATTATAAAGTCCTCCCAGCCACTGTCCAATGATCATTGCAAGTATTTCTTGTTTCAGCTCCTCCGAGGTCTTAAATATCTTCATTCTGCAAACATTCTTCACCGGGACCTGAAGCCTGGGAATCTGCTCATCAATGCCAATTGTGATTTGAAGATATGTGACTTTGGGCTTGCGCGAACCAATGGAGTTGATGGCCAGTTTATGACAGAGTATGTTGTGACTCGCTGGTACCGTGCTCCAGAGCTCCTGTTATGCTGTGACAATTATGGAACCTCTATCGATGTATGGTCTGTAGGATGCATTTTTGCTGAGATTCTTGGCAGAAAGCCAATCTTCCCTGGAACTGAGTGCCTTAACCAGCTGAAACTAATTATAAGTGTCCTTGGAAGCCCGCATGAATCTGATCTTGAGTTTATTGATAATACAAAAGCCAGGAGGTTTATCAAATCATTGCCCTTTACAAGGGGCAGACACTTCTCTCAGCTATACCCTCAAGCAGATCCACTAGCCATAGATTTGTTGCAAAAAATGCTTGTCTTTGATCCAACTAAAAGAATTACTGTCTTAGAGGCACTCCAACACCCTTATTTGGCTGGCCTATATGATCCAAGGTGTAACCCTCCTGCTCAGGTTCCTATCAATCTTGACATAGATGAAAATTGGGGCGAACAGATGATTAGGGAAATGATGTGGAATGAGATGCTTCATTATCATCCTGAAGCTGCTTCTGCCAATGCATAG 1107 0.4146 MATLVEPPNRIKPKGKHYYTIWQTLFEIDIKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIGNIFENCIDALRTLRELKLLRHIRHENVIALKDVMMPIHRTSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNGVDGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVLGSPHESDLEFIDNTKARRFIKSLPFTRGRHFSQLYPQADPLAIDLLQKMLVFDPTKRITVLEALQHPYLAGLYDPRCNPPAQVPINLDIDENWGEQMIREMMWNEMLHYHPEAASANA* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01221 368 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01221 368 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01221 368 CDD STKc_TEY_MAPK 26 361 - -
Rops2g01221 368 SUPERFAMILY Protein kinase-like (PK-like) 31 325 IPR011009 -
Rops2g01221 368 FunFam Mitogen-activated protein kinase 116 345 - -
Rops2g01221 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 32 332 - -
Rops2g01221 368 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Rops2g01221 368 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01221 368 FunFam Mitogen-activated protein kinase 18 126 - -
Rops2g01221 368 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Rops2g01221 368 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Rops2g01221 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Rops2g01221 368 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01221 Rops-Chr2 17565429 17569098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01221 1 368 MAP Kinase Gene Family AT2G18170 84.511 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Rops2g01221 Pkinase 2.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01221 K20537 - gmx:100783422 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01221 2 17565429 17569098 Rops2g01221 2 17565429 17569098 ECH