Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01220 ATGGCTTCTCCTGGTGGAGCTTATTCATCTGGTTCTAGCTCTCTTCAAAACTCTGCATCTGGTTCTGAGGGAGACCCGAAGCAACATATCATGGAGCAGAAGAAGAGAAAGAGAATGCAGTCTAATAGGGAATCTGCACGTAGATCAAGGATGAAGAAGCAACAACACTTAGAGGGTCTTAGTGTCCAAGTGGATCAACTCAAGAAAGAGAACAACCAAATCAGCACAAACATTGGGACCACAACACAGCTTTACCTGAACGTGGAGGCTGAGAATGCAATTCTGAGGGTTCAGATGGCTGAACTCAGCAATAGATTGCAGTCACTTAATGAAATCATACATTTCATAAACTCAAGCAACAACCTCTTTCATGAGGCTCAGGAGATTATTCATTTCAATGATTGTGGCTTCATGGACACGTGGAATCAACCAATCATGGCTTCAGCTGACATGTTGATGTATTGA 465 0.428 MASPGGAYSSGSSSLQNSASGSEGDPKQHIMEQKKRKRMQSNRESARRSRMKKQQHLEGLSVQVDQLKKENNQISTNIGTTTQLYLNVEAENAILRVQMAELSNRLQSLNEIIHFINSSNNLFHEAQEIIHFNDCGFMDTWNQPIMASADMLMY* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01220 154 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 150 - -
Rops2g01220 154 SMART brlzneu 30 94 IPR004827 GO:0003700|GO:0006355
Rops2g01220 154 FunFam BZIP transcription factor 32 83 - -
Rops2g01220 154 Gene3D - 32 88 - -
Rops2g01220 154 MobiDBLite consensus disorder prediction 1 24 - -
Rops2g01220 154 Coils Coil 50 77 - -
Rops2g01220 154 MobiDBLite consensus disorder prediction 1 63 - -
Rops2g01220 154 SUPERFAMILY Leucine zipper domain 34 86 IPR046347 GO:0003700|GO:0006355
Rops2g01220 154 CDD bZIP_plant_GBF1 35 85 IPR045314 GO:0003700|GO:0006355
Rops2g01220 154 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 32 78 IPR004827 GO:0003700|GO:0006355
Rops2g01220 154 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 37 52 IPR004827 GO:0003700|GO:0006355
Rops2g01220 154 Coils Coil 85 112 - -
Rops2g01220 154 Pfam bZIP transcription factor 32 85 IPR004827 GO:0003700|GO:0006355
Rops2g01220 154 MobiDBLite consensus disorder prediction 27 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01220 Rops-Chr2 17551517 17552675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01220 27 154 bZIP Transcription Factor Family AT4G34590 51.429 3.23e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops2g01220 bZIP_1 2.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01220 K25786 - gmx:778140 184.882