Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01206 ATGGCTGAGGTGGCTCAGAAGAAGAGGAACACCACCAAGAAGGAAAACACGAATCTTCTATTGGGTCGGTTCGAGCTAGGCAAGCTCCTGGGCCATGGAACCTTCGCAAAAGTGCACCATGCCCGGAACATCAAAACGGGTGAAGGGGTAGCCATAAAGATCATAAACAAAGAGAAGATCCTAAAGAGTGGTTTGGTGTCACACATCAAACGCGAGATCTCAATCCTCCGCCGTGTCCGCCACCCCAACATCGTGCAACTCTTCGAAGTTATGGCCACAAAAACAAAGATCTACTTCGTCATGGAGTACGTGCGTGGTGGCGAGCTTTTCAACAAGGTTGCAAAAGGAAGGTTGAAAGAAGAAGTTGCAAGGAAATACTTTCAACAATTGGTTTGTGCGGTGTCGTTTTGTCATGCTAGAGGGGTGTTCCATAGGGATCTCAAGCCTGAAAACTTGTTACTTGATGAGAATGGTAACCTTAAAGTTTCTGATTTTGGACTCAGTGCTGTGTCTGATCAAATTAGGCAAGATGGGTTGTTTCACACGTTTTGTGGGACACCTGCTTATGTCGCTCCTGAGGTTTTGGCTAGGAAAGGCTACGATGGTGCTAAGGTTGATATTTGGTCTTGTGGGGTTGTTTTGTTTATTTTGATGGCTGGTTATTTACCTTTCCATGATCGAAATATCATGGCTATGTACAAGAAGATTTATAAGGGTGAGTTTAGGTGTCCTAGGTGGTTCTCACCTGAACTTTCTAGTCTTCTCACTAGGCTTCTTGATACCAATCCTGAAACAAGGATTTCTATTCCGGAGATTCTGGAGAACCGGTGGTTTAAGATAGGTTTCAAGCATATAAAATTCTATGTGGAGGATGATAAGGTGCATCATGATGATTTTGATTTGGAATTGGAATCGGTTTCGGATTTGTCAGTGTCAGAATCTGATTCTGAGGTTGAGATTGCCAGAAGGAGGAATAATAATAATAATAATGCTTCATTGCCAAGACCTGCAAGTTTGAATGCATTTGACATCATATCATTTTCTCAGGGTTTTGATCTTTCTGGGTTGTTTGAGGAAAAGGGTGATGAGGCGAGGTTTGTGTCTGGTGCCCCAGTGTCTAAGATTATATCAAAATTGGAGGAAATTGCAGAGTTGGTTAGTTTTACTGTGAGGAAGAAAGATTGCAGGGTTAGCTTGGAGGGTTGTAGAGAAGGGGTAAAGGGGCCATTGACCATTGCTGCAGAGATATTTGAGTTGACTCCTTCTTTGGTGGTGATTGAGGTGAAGAAAAAAGCAGGGGATAAAGCAGAGTATGAGAAGTTTTGTAACTCTGAATTGAAGCCCGCGTTGCAGAATTTGATGATGGAGGAATCTGCAACTTCTTCACACCAACCTATACAAGCTCGACCTTTGCAACAACGTGTACTTTCTGACTCTGCCCTCAACAGATCCTCATCAGATACTGAATCTTTGTACTTGGATACCTGA 1488 0.4308 MAEVAQKKRNTTKKENTNLLLGRFELGKLLGHGTFAKVHHARNIKTGEGVAIKIINKEKILKSGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLVCAVSFCHARGVFHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDIWSCGVVLFILMAGYLPFHDRNIMAMYKKIYKGEFRCPRWFSPELSSLLTRLLDTNPETRISIPEILENRWFKIGFKHIKFYVEDDKVHHDDFDLELESVSDLSVSESDSEVEIARRRNNNNNNASLPRPASLNAFDIISFSQGFDLSGLFEEKGDEARFVSGAPVSKIISKLEEIAELVSFTVRKKDCRVSLEGCREGVKGPLTIAAEIFELTPSLVVIEVKKKAGDKAEYEKFCNSELKPALQNLMMEESATSSHQPIQARPLQQRVLSDSALNRSSSDTESLYLDT* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01206 495 FunFam Non-specific serine/threonine protein kinase 14 324 - -
Rops2g01206 495 Gene3D Transferase(Phosphotransferase) domain 1 13 336 - -
Rops2g01206 495 FunFam Non-specific serine/threonine protein kinase 336 454 - -
Rops2g01206 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Rops2g01206 495 Gene3D Kinase associated domain 1, KA1 337 456 - -
Rops2g01206 495 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 11 450 - -
Rops2g01206 495 Pfam Protein kinase domain 25 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01206 495 SMART serkin_6 24 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01206 495 CDD STKc_SnRK3 23 277 - -
Rops2g01206 495 Pfam NAF domain 336 392 IPR004041 GO:0007165
Rops2g01206 495 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Rops2g01206 495 ProSiteProfiles Protein kinase domain profile. 24 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01206 495 CDD CIPK_C 340 451 - -
Rops2g01206 495 FunFam Non-specific serine/threonine protein kinase 15 103 - -
Rops2g01206 495 ProSiteProfiles NAF domain profile. 334 358 IPR018451 GO:0007165
Rops2g01206 495 SUPERFAMILY Protein kinase-like (PK-like) 20 279 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01206 Rops-Chr2 17344368 17346129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01206 1 489 CBL-interacting serine-threonine protein kinases AT4G18700 74.044 0.0 745
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops2g01206 Pkinase 7.3e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01206 - - gmx:100786078 793.497