Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01205 ATGGAAGGTAAATGGAACCTATTTGGATTATGGTTCATGCTATATGTTGGATCGATTTCACTGTGGGGAATTCGACAATGTTGGTCTCTGAATGATGAAGGATTGGCTTTGTTGGAATTTCGGGTAAGAATAACTTCTGATCCTTATGGTGCTTTGGCAAATTGGAATCCAAATGATGTCGACCCTTGCAAGTGGTTAGGTGTTCATTGTGTTGATGGCAAAGTGCAAAGGCTGGACCTAAATGGTCTATCATTGGAAGGGACATTAACTCCTCATCTTGGGAAACTTAATCACTTAAGATCTCTTGTGTTATCCAAGAACAATTTTTATGGCACCATTCCCAAAGAACTTGGAGATCTAGACAAACTGGAGTTATTGGATTTCAGGGAGAATAACTTGAGTGGAAATGTCCCAGCTGAAATTGGCAGGATGTTATTGTTAAAACAATTATTGGTTTTTGACAATAAAATTGAAGGAAGTGATTCTCAAGAGCTTGGAAAGATCAAACTGACCTCTAAATCACTAGTTGTTGACTATTATTCATCACCTCTGACAAGTTTATTTCACTGCAATAACAGAAAGTTTGCACACTGTGTGTGGTATAAAGATTTCAAGCAATGGAGCAAGGTAGATTCGTTGGTCATTCCAATTAAAGGAGCACTCAAAAAATACCTTAGTACCTTTGCACTGCCACTATGGTTCAAGCTAGGAAAGGCTGCCACTGATGGCTATGAGGAGAATTACTGGGACAATCTGCATAGTTTTGATGAGTCCGAGATTGACCAGAATGTATCAAATCTAGTCAATTCTGCACGTCGGAAGTTACTTGATCAATCTAGTAATCTTGCAGCTGCACCTTTTAGTGGTGGGCCTACTATACAGATCAGTTCTCTTCCAACTACCGTGAGCAGTGGAGCTTTCCCAGCTGTGCCAGATGCCAATAAGAAACAAAATCAGTCACCTGCATCACTGCCTTCACCTTCTGATTCTCCACATCAGACAAGTCAACAAAGTTCAGCTAATGGTGCCCCAGGAAAATCGTGGAAGTATATTATTATAATCTTAGGTGTGGCTGTCTTGGTCATCGTTATTGTGATCTTGCTTTGCATTTGGCGAAAACGAGCAGCAAAAGTAATAAAGCCCTGGAAGACTGGAATAAGTGGACAGTTGCAGAAAGCATTTGTAACAGGGGTTCCCAAGTTGAATCGAGCAGAGTTGGAGACAGCATGTGAAGATTTCAGCAATATCATTAATGGTCATGATGAGTGCACCATATACAAAGGAACACTGTCCAGTGGAGTTGAGATTGCTGTTGGTTCTACTACTATCACTTCTTCCCAAGATTGGTCGAAGAACATGGAGATGGCCTATCGGAAAAAGATTGATACTCTGTCCCGTGTTAACCATAAGAACTTTACCAATCTTATTGGGTACTGTGATGAAGAAGAACCTTTCACAAGGATGATGGTATTTGAGTATGCTCCAAATGGAAACTTATTCGAGCATCTGCATGTTGAGGAAGTTGAACATCTTGATTGGAGTGCAAGGATGAGGATTATAATGGGCATGTCATATTGTCTTCAGTACATGCACCATGATCTGAATCCACCAGTAGCTCATTCCAACCTTAATTCACTTGTTATATTATTAACAGATGACTATGCTGCTAAGATTTCAGAGGTCAGTTTTGGCAGTCATGTATTATCACCAGCCAGCACAACTGGAGATGAATCAAAGAAATCTGAGTTGCCACCCCATGCTGATCCCGAAACCGATGTCTATAACTTTGGAATGTTGTTGCTCGAAATCATTTCTGGGAAACTACCTTACTCTGAAGAACAAGGTCACCTTGTGAACCGGGCTGCTGAGTACTTGAATGATAAGCAAAGCATCAGCAATTTGATCGATCCTTCACTTGAGTCCTTCAAGGATAATGAACTTGATGTCATCTGTGAGGTGATCAAAGATTGTGTTCAATCTGATCCAAGGTTAAGACCAACAATGAAGGACATAACACCCAGATTGAGGGAAGTGCTTGGTATATCACCTGAGCAAGCGGTCCCAAGACTTTCTCCACTTTGGTGGGCTGAACTGGAGATCTTGTCAGTGGAGACCACTTAA 2121 0.4102 MEGKWNLFGLWFMLYVGSISLWGIRQCWSLNDEGLALLEFRVRITSDPYGALANWNPNDVDPCKWLGVHCVDGKVQRLDLNGLSLEGTLTPHLGKLNHLRSLVLSKNNFYGTIPKELGDLDKLELLDFRENNLSGNVPAEIGRMLLLKQLLVFDNKIEGSDSQELGKIKLTSKSLVVDYYSSPLTSLFHCNNRKFAHCVWYKDFKQWSKVDSLVIPIKGALKKYLSTFALPLWFKLGKAATDGYEENYWDNLHSFDESEIDQNVSNLVNSARRKLLDQSSNLAAAPFSGGPTIQISSLPTTVSSGAFPAVPDANKKQNQSPASLPSPSDSPHQTSQQSSANGAPGKSWKYIIIILGVAVLVIVIVILLCIWRKRAAKVIKPWKTGISGQLQKAFVTGVPKLNRAELETACEDFSNIINGHDECTIYKGTLSSGVEIAVGSTTITSSQDWSKNMEMAYRKKIDTLSRVNHKNFTNLIGYCDEEEPFTRMMVFEYAPNGNLFEHLHVEEVEHLDWSARMRIIMGMSYCLQYMHHDLNPPVAHSNLNSLVILLTDDYAAKISEVSFGSHVLSPASTTGDESKKSELPPHADPETDVYNFGMLLLEIISGKLPYSEEQGHLVNRAAEYLNDKQSISNLIDPSLESFKDNELDVICEVIKDCVQSDPRLRPTMKDITPRLREVLGISPEQAVPRLSPLWWAELEILSVETT* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01205 706 MobiDBLite consensus disorder prediction 309 344 - -
Rops2g01205 706 Pfam Protein tyrosine and serine/threonine kinase 425 674 IPR001245 GO:0004672|GO:0006468
Rops2g01205 706 Gene3D Ribonuclease Inhibitor 29 214 IPR032675 -
Rops2g01205 706 PANTHER PROTEIN MALE DISCOVERER 2 24 704 - -
Rops2g01205 706 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Rops2g01205 706 Gene3D Phosphorylase Kinase; domain 1 387 493 - -
Rops2g01205 706 SUPERFAMILY Protein kinase-like (PK-like) 398 674 IPR011009 -
Rops2g01205 706 FunFam Inactive receptor-like serine/threonine-protein kinase 385 493 - -
Rops2g01205 706 MobiDBLite consensus disorder prediction 313 344 - -
Rops2g01205 706 ProSiteProfiles Protein kinase domain profile. 296 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01205 706 FunFam Nuclear pore complex protein NUP107 30 186 - -
Rops2g01205 706 MobiDBLite consensus disorder prediction 569 588 - -
Rops2g01205 706 SUPERFAMILY L domain-like 38 169 - -
Rops2g01205 706 Gene3D Transferase(Phosphotransferase) domain 1 494 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01205 Rops-Chr2 17321846 17329899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01205 52 678 Receptor kinase-like Gene Family AT5G56040 24.588 2.67e-43 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Rops2g01205 PK_Tyr_Ser-Thr 1.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01205 - - gmx:100808098 1011.91