Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01204 ATGAGTATGTCAGATGGATATGAGATTCATGACAATGAGAGAAGTGGCAGGAGTGAGGAACAAGCTGATGACACTTCAATAGGATCTTCACAGAAATGCTCATTCTTTGACTTGAATGAAGAAGCTAGTAGTGAAGATAACAATGAAAATGATGAGGCCTGTGAACTCATGGCTGAGGGATATGAGAAAGCAAAGGATGAAGGTACTTCAACTAATATAAGTAGCGCAACAAGGGAAGGAGATGAAAGAAGAGGTGGTGTGAGACAATATGTTAGATCAAAGATGCCTCGGCTTCGGTGGACTCCTGATCTTCATCTCTCCTTTGTGCATGCTGTTGAAAGGCTTGGTGGTCAAGAGAGAGCAACACCCAAGTTGGTGCTTCAGCTAATGAATGTAAGAGGACTCAGCATTGCACATGTCAAGAGTCACTTGCAGATGTACCGAAGCAAGAAACTTGACGAGGCCGGGCAAGTACTAAGTGAAACACATGGATCAACCCATGAACTAGGTCGTATATCTCGTGTAGCCCATCAGCCAATAATTCCTCATCATCATTTCAAGATGGGAAATGGTGGAATTATTCTAACGAGTAACTACAACGAGCATAGTTATTTCCCGGGTCTCCTATCACATTCACATTCAAAGGCCATCGATTCAAGGCACCAACAATGGTACTCTAATCATCAACCTTTTAGAAGAACAAGTTATATAAGCAATGAAGTTGTCTCCTCAACGGCCTTACAAACGCAAGGAAGATCAAACCAAATTCAACTAACAGATAATACCAGACTTGCACCTATGAGACCAAGCCAATTTCTTGAAGAGAAAAGGTGGCCTCCATTAGAAATTATGAACAATCATCAGTGGAAGAAAAACTATACATCACAATCAGGTGTACATCAATTTGGCACCACTCCGACATCTTTTAGACCAGCTGAGGCGACCTTTGGGAACAACACAAGAATCAGGGAAAATCTATCAAACTCCGATGAGCACCACAAGTATTCCAACAGTTTAAAGCTAGAATTATATCCCCCATTTCGGATTAAGTTGAATCAAGAAAAAATGCAGATAGACAAGCAATGGGTGCCAGATTTGCAACTGAGTTTAAGTCAGAAAAATGGCAACAACGATGGCAATAGTGATCATTGCAGAGAAAACCAAGAAATCAACACGAAACTTTCACTTTCTTAG 1194 0.4104 MSMSDGYEIHDNERSGRSEEQADDTSIGSSQKCSFFDLNEEASSEDNNENDEACELMAEGYEKAKDEGTSTNISSATREGDERRGGVRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLSETHGSTHELGRISRVAHQPIIPHHHFKMGNGGIILTSNYNEHSYFPGLLSHSHSKAIDSRHQQWYSNHQPFRRTSYISNEVVSSTALQTQGRSNQIQLTDNTRLAPMRPSQFLEEKRWPPLEIMNNHQWKKNYTSQSGVHQFGTTPTSFRPAEATFGNNTRIRENLSNSDEHHKYSNSLKLELYPPFRIKLNQEKMQIDKQWVPDLQLSLSQKNGNNDGNSDHCRENQEINTKLSLS* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01204 397 MobiDBLite consensus disorder prediction 7 21 - -
Rops2g01204 397 MobiDBLite consensus disorder prediction 370 397 - -
Rops2g01204 397 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 152 IPR017930 -
Rops2g01204 397 SUPERFAMILY Homeodomain-like 94 150 IPR009057 -
Rops2g01204 397 Gene3D - 95 152 - -
Rops2g01204 397 FunFam Myb family transcription factor 94 152 - -
Rops2g01204 397 Pfam Myb-like DNA-binding domain 98 148 IPR001005 -
Rops2g01204 397 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 67 258 IPR046955 GO:0003700
Rops2g01204 397 MobiDBLite consensus disorder prediction 1 50 - -
Rops2g01204 397 MobiDBLite consensus disorder prediction 63 86 - -
Rops2g01204 397 NCBIfam myb-like DNA-binding domain, SHAQKYF class 96 151 IPR006447 GO:0003677
Rops2g01204 397 MobiDBLite consensus disorder prediction 22 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01204 Rops-Chr2 17282492 17293206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01204 87 157 G2-like Transcription Factor Family AT2G42660 78.873 2.50e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Rops2g01204 Myb_DNA-binding 1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01204 - - gmx:100808625 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01204 2 17282492 17293206 Rops2g01204 2 17282492 17293206 ECH
Rops11g00710 11 10084046 10093789 Rops2g01204 2 17282492 17293206 ECH
Rops2g01204 2 17282492 17293206 Rops11g00710 11 10084046 10093789 PCT