Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01201 ATGAAACTCTTTTGCAGATTCTTGATTCTTCTAGCGCTATTTTCTCTCACGGAATCCTCATGCAACAGTGGAGACCAGGTCTTGGTGTCAAAGGCTTTCAAATCTGTCTCTGGGTTCAACGTTTCCACCTGGTTCCAAACAAGAGGTTTTTCTAACTGTTCAGAGGCTCAGATCAGAAAATTAGTACTTCCATCCAAAAATCTAAGTGGGACAATTTCATGGGGCTATCTGAGGAACATGTCCAAATTACAGGTTCTTGATCTCTCTGGGAATTCCCTAGAAGGCCATGTGCCAAGCTGGTTTTGGTCAAGTTCATCCTTATTGGAAGTGAATCTTTCAAAGAACAGGTTAGGAGGTAGCGTCATTATTGAGTTGAAACCTTCATCAGAAAACACCTCGTTTTCATCCATTCAAATGCTCAATCTCTCACACAACAGGTTCACCAACTCGGTTCAACTTTATGGCTTCCCAAACCTAAAAAGCCTCGACCTTTCTCACAACAAGCTAGGAACATTCCCCTCCGGGTTCCTAAACCGCACCAAGCTACAACACCTTGACCTCTCAAGCTGCAATCTCCAAGGCAACATAAAACCCATTTCTTCCCTTCACTCACTTCGCTACTTAGACTTATCAAACAACACTTTGACCGGTTCTTTCCCTTCTGATTTCCCTCCACTTAACACCCTCCAATTCTTGAACATCTCACACAACAACTTCAACTCTTCAGTTAGCTTAAACAAGTTCAAGAAATTCAGCAAATCAGCTTTCATCCACGCTGGCAATAACTTCACCTACGACGACGACAACAACAACAATAAATCCAAAACTCCCAATCGTCAATATTCAACCACAACCCCACCACCACTCCAACCCCACATAGAAAAACAAACCATTCATCAGAAACAACCCAAACCAAAATCCAAAACACTGATTCCTGCAGTGTGTTCTGCATTATCAGCACTTGTCCTGGTTCTTCTGTCCATTTGGGTACTTCACATTATTTACAAAAGGAGGAAGCAACGTTCCAAGAGGAACAAATGGGCAATCACCTTTCCTGTCCCACAAGGCATGAACATGATCAACACCAAGGTGGAGAAATCAGGACCGTTCGCATTCGAAACAGAATCAGGGTCCACATGGGTGGCTGACCTGAAAGAACCATCTTCTGCACCGGTAGTAATGTTCGAGAAGCCATTGATGAACCTCACCTTCAAGGACCTCATCGTTGCCACGTCACACTTTGGCAAGGACTCACTTCTCGCAGAGGGAAGGTGTGGGCCAGTGTACAGGGCAGTGCTACCTGCTGACCTCCACGTGGCAATCAAGGTACTGGAACATGCCAGAGACGTTGATCGTGATGACTGTGTCGCTATGTTCGTTGACCTCTCTAAACTCAAGCACCCCAACTTGTTGCCACTCTCCGGTTACTGCATTGCAGGTAAGGAGAAGTTGGTATTGTACGAGTTCATGGCAAACGGTGATTTGGGTATATGGCTACACGAGCTTCCAACAGGGGACACCAACGTGGAGGATTGGACTGGTGACACGTGGGAGATACAAAACGGCGTCGTTGAAGCATCCTCGGAAAAGATGGGGTGGCTGACACGACATCGTATTGCGGTGGGGATAGCACGTGGTCTCGCATATCTCCACCACGCGGGTTCGAAACCCATCGTGCACGGCCACTTAGTCACGTCCAACATTTTACTCGCCGATGATTTCGAGCCACGGATCGCCAATTTCGGGTTGAGAATCGACCCGAACCCTAATGGCGGCACCGAGGCTGACGTGTACTGCTTCGGGGTGGTGCTGATGGAGCTTCTGACGGGGAGGACTGGCACGGCGGAAACAGTGGTTGCGGTTAGAAAGGCGGTGAGGGATGGACACGGCGTTAGGGTTCTGGACGAGAGGCTTCGACTCGGTGGTGACTCAGTAGTGAGTCAGATGGTGGAGAGTCTCCGAGTCGCGTTCCTTTGTACGGCTGAGTCGGCTTCTAAGAGGCCCACCATGCAGCAGCTTGGGATGTCCTCGTCAGCACGTAGAACAAAAGGCACCGGCACATTTGCATAA 2070 0.4821 MKLFCRFLILLALFSLTESSCNSGDQVLVSKAFKSVSGFNVSTWFQTRGFSNCSEAQIRKLVLPSKNLSGTISWGYLRNMSKLQVLDLSGNSLEGHVPSWFWSSSSLLEVNLSKNRLGGSVIIELKPSSENTSFSSIQMLNLSHNRFTNSVQLYGFPNLKSLDLSHNKLGTFPSGFLNRTKLQHLDLSSCNLQGNIKPISSLHSLRYLDLSNNTLTGSFPSDFPPLNTLQFLNISHNNFNSSVSLNKFKKFSKSAFIHAGNNFTYDDDNNNNKSKTPNRQYSTTTPPPLQPHIEKQTIHQKQPKPKSKTLIPAVCSALSALVLVLLSIWVLHIIYKRRKQRSKRNKWAITFPVPQGMNMINTKVEKSGPFAFETESGSTWVADLKEPSSAPVVMFEKPLMNLTFKDLIVATSHFGKDSLLAEGRCGPVYRAVLPADLHVAIKVLEHARDVDRDDCVAMFVDLSKLKHPNLLPLSGYCIAGKEKLVLYEFMANGDLGIWLHELPTGDTNVEDWTGDTWEIQNGVVEASSEKMGWLTRHRIAVGIARGLAYLHHAGSKPIVHGHLVTSNILLADDFEPRIANFGLRIDPNPNGGTEADVYCFGVVLMELLTGRTGTAETVVAVRKAVRDGHGVRVLDERLRLGGDSVVSQMVESLRVAFLCTAESASKRPTMQQLGMSSSARRTKGTGTFA* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01201 689 Gene3D Transferase(Phosphotransferase) domain 1 521 588 - -
Rops2g01201 689 Gene3D Transferase(Phosphotransferase) domain 1 589 685 - -
Rops2g01201 689 Pfam Leucine rich repeat 200 239 IPR001611 GO:0005515
Rops2g01201 689 Pfam Leucine rich repeat 58 117 IPR001611 GO:0005515
Rops2g01201 689 Pfam Leucine rich repeat 136 192 IPR001611 GO:0005515
Rops2g01201 689 Gene3D Phosphorylase Kinase; domain 1 374 489 - -
Rops2g01201 689 SUPERFAMILY Protein kinase-like (PK-like) 391 673 IPR011009 -
Rops2g01201 689 FunFam Putative LRR receptor-like serine/threonine-protein kinase 375 489 - -
Rops2g01201 689 ProSiteProfiles Leucine-rich repeat profile. 158 179 IPR001611 GO:0005515
Rops2g01201 689 ProSiteProfiles Protein kinase domain profile. 414 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops2g01201 689 PRINTS Leucine-rich repeat signature 159 172 - -
Rops2g01201 689 PRINTS Leucine-rich repeat signature 202 215 - -
Rops2g01201 689 Pfam Protein tyrosine and serine/threonine kinase 418 585 IPR001245 GO:0004672|GO:0006468
Rops2g01201 689 MobiDBLite consensus disorder prediction 266 290 - -
Rops2g01201 689 SUPERFAMILY RNI-like 47 265 - -
Rops2g01201 689 Gene3D Ribonuclease Inhibitor 128 277 IPR032675 -
Rops2g01201 689 FunFam Calmodulin-binding receptor kinase CaMRLK 135 245 - -
Rops2g01201 689 SMART LRR_typ_2 202 225 IPR003591 -
Rops2g01201 689 SMART LRR_typ_2 80 103 IPR003591 -
Rops2g01201 689 SMART LRR_typ_2 156 179 IPR003591 -
Rops2g01201 689 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 52 196 - -
Rops2g01201 689 Gene3D Ribonuclease Inhibitor 25 127 IPR032675 -
Rops2g01201 689 MobiDBLite consensus disorder prediction 668 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01201 Rops-Chr2 17218409 17221559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01201 56 670 Receptor kinase-like Gene Family AT5G07280 29.472 5.37e-65 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Rops2g01201 PK_Tyr_Ser-Thr 7.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01201 - - gmx:100788556 962.214