Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01190 ATGCCCACTTTCTGGGGTCATTTGAGTCCACCGTTGATGTCACATCATGCAACACAAAGTGGCCAAGCCAATATGGTGGGCATGCATTTGCGTCTAATTGGTGGAGCAACAGCTCAAGGATTTTGGACACCCCAGCAGCAACAATTCGTGCTCTATAACAGTTGAAGTGAAAGACCAAGGCTCACATTTCAAATTTCATGTTTCCTTTTCCTCAGTGCCATTGCTGGGACATCCATCACACAATATTTCTTCCTTCTGGGGATCCAATACACCTCGGCTACCTTTGCTTGTGCCTTTGTCAATATGGTGCCTGTGATCACTTTCATTATGGCATTACCATTTGGATTAGAGACTGTGAACATTAAATGCAAGAGTGGGAAAGCAAAGATTCTTGGTACATTTGTGTGCCTGGGAGGGGCATTGTTGTTGACACTTTACAAAGGAAAGCCATTGTTTGATTATTCTCACTATCAGTCTACAGCTCCAGTAGCCATGAAATCTGCAATGGAGCAAGCTTCTACTAACAGAATAATGGAGAAATGGACCATTGGTGTAATAGCTTTGATTCTGGGAACCCTCTTTTGGTCTTCTTGGTTTATTTTACAATCATATATAGGCAAGAGATACCCATGCCAGTATTCCAGCACAGCCATCATGACATTCTTTGGAGCCATGCAATCAGCTATCCTTGGTTTGTCCACTGGCAGGAACTTATCCATGTGGATTATCAAGGGAAAGATACAAATAATCACAATTCTGTATTCTGGGATGGTTGGATCAGGTATCTGCTATGTGGGCATGTCATGGTGTGTCAAGAAGAGGGGACCTGTCTTCACTGCAGCATTCAGCCCTCTTGTTCAGATAATGGCAGCCATGATTGATATCCCGGTCTTGCATGAACAGCTCCATCTTGGAAGTGTGATGGGGTCCATGTTGGTGATGATTGGATTATACATTCTTCTATGGGGTAGGAGCAAGGAGATGCAAAATGGTGGGATCAAGTTCGTCCAAGAAGTAGAAGAAATGAAGGAACAAGAGCCGCAAATACAACAAGTTGTTGTCTCCATTGATTCACGGAGTCACTGA 1086 0.4355 MPTFWGHLSPPLMSHHATQSGQANMVGMHLRLIGGATAQGFWTPQQQQFVLYNS*SERPRLTFQISCFLFLSAIAGTSITQYFFLLGIQYTSATFACAFVNMVPVITFIMALPFGLETVNIKCKSGKAKILGTFVCLGGALLLTLYKGKPLFDYSHYQSTAPVAMKSAMEQASTNRIMEKWTIGVIALILGTLFWSSWFILQSYIGKRYPCQYSSTAIMTFFGAMQSAILGLSTGRNLSMWIIKGKIQIITILYSGMVGSGICYVGMSWCVKKRGPVFTAAFSPLVQIMAAMIDIPVLHEQLHLGSVMGSMLVMIGLYILLWGRSKEMQNGGIKFVQEVEEMKEQEPQIQQVVVSIDSRSH* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01190 360 PANTHER WAT1-RELATED PROTEIN 51 337 IPR030184 GO:0016020|GO:0022857
Rops2g01190 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 65 146 - -
Rops2g01190 360 Pfam EamA-like transporter family 65 143 IPR000620 GO:0016020
Rops2g01190 360 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020
Rops2g01190 360 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01190 Rops-Chr2 17090680 17095435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01190 45 359 Nodulin-like Gene Family AT1G01070 38.924 5.30e-76 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01190 - - gmx:100791663 482.256