Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01184 ATGGTTGATATTGCCAAGGCATTGGCAAGGCCAGCCTCTTACACAACCAAGTACTTCGGTTGTGAACTTGGAGCCCAATCTAAATTTGATGAGAAGGCTGGGACTTCTCATGTTAATGGGACATATGACACTCAGCAACTTGCTTCACATGGACTGTTCGATGTGCACGTAAAGGCTACAGGTGATATACATATCGATGATCATCACACAAATGAAGATGTTGCTCTTTCTATTGGAACGGCTTTGCTGCAGGCTCTTGGTGATAGGAAGGAGTCTTTGGTTGATCATTGTGAGTTGGATAGGCAAGGTGTGGATTTGGAGATGGGAGTTGTAAAGCATGATTCAAGACCTCAGAAGCTACAGAAAACCGGGGTCTATGAGAGAATGGCAGTGACTAGGTTTGGAGCTTCAGCACAACTGGGGCTCTTGAAGGCGCTCACTTTCTCTCTACCGGGGAACTTGTTAGTCTTAGCGAGCAACAGCTTGTCGATTGTGATCACGAGTGTGATCCAGATGAACCAGGTTCTTGCGACTCAGGGTGCAACGGTGGATTGA 555 0.4667 MVDIAKALARPASYTTKYFGCELGAQSKFDEKAGTSHVNGTYDTQQLASHGLFDVHVKATGDIHIDDHHTNEDVALSIGTALLQALGDRKESLVDHCELDRQGVDLEMGVVKHDSRPQKLQKTGVYERMAVTRFGASAQLGLLKALTFSLPGNLLVLASNSLSIVITSVIQMNQVLATQGATVD* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01184 184 Pfam Domain found in IF2B/IF5 1 49 IPR002735 GO:0003743|GO:0006413
Rops2g01184 184 PANTHER IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE HIS7 45 90 IPR000807 GO:0000105|GO:0004424
Rops2g01184 184 SUPERFAMILY Ribosomal protein S5 domain 2-like 45 90 IPR020568 -
Rops2g01184 184 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 1 44 IPR016189 GO:0003743|GO:0006413
Rops2g01184 184 ProSitePatterns Imidazoleglycerol-phosphate dehydratase signature 1. 65 78 IPR020565 GO:0000105|GO:0004424
Rops2g01184 184 FunFam Imidazoleglycerol-phosphate dehydratase HisB 9 92 - -
Rops2g01184 184 Gene3D Imidazole glycerol phosphate dehydratase; domain 1 48 90 IPR038494 -
Rops2g01184 184 Gene3D - 1 47 - -
Rops2g01184 184 Pfam Imidazoleglycerol-phosphate dehydratase 45 90 IPR000807 GO:0000105|GO:0004424
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01184 Rops-Chr2 17004639 17005193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g01184 1 58 Eukaryotic Initiation Factors Gene Family AT1G36730 72.414 1.74e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01184 K01693 K03262 egt:105961857 94.7449