LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops2g01170	ATGTGTACCAGTGGGAATGAGCAGGAAAAGGCTCTGAATATGGCCAGAGAAGCAATGGAGAAGATAGAAGAAGAGATAAAGGGGAAGAAATTCTTTGGAGGGGAAAATATTGGGTACCTTGACATTGCACTTGGGTGGATTTCTTATTGGCTTCCTGTTTGGGAGGAAGTTGGGTCCATGCAAATAATAGACCCATTGAAATGTTCAGGCACCACTGCATGGATGACCAATTTTCTCAACCATCCTGTGATCAAGGACAGCTTGCCCCCAAGAGACAAGATGCTTGTTTACTTCCACAGTCGTAGAAAGGCATTGTCTTCAGCTTTTCATGGCTGGTTCAAGGTCTAG	348	0.4454	MCTSGNEQEKALNMAREAMEKIEEEIKGKKFFGGENIGYLDIALGWISYWLPVWEEVGSMQIIDPLKCSGTTAWMTNFLNHPVIKDSLPPRDKMLVYFHSRRKALSSAFHGWFKV*	116

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops2g01170	115	PANTHER	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	4	94	IPR045073	-
	Rops2g01170	115	Gene3D	-	1	108	-	-
	Rops2g01170	115	CDD	GST_C_Tau	3	98	IPR045074	GO:0004364\|GO:0006749
	Rops2g01170	115	Coils	Coil	5	25	-	-
	Rops2g01170	115	FunFam	Tau class glutathione S-transferase	1	108	-	-
	Rops2g01170	115	SUPERFAMILY	GST C-terminal domain-like	4	103	IPR036282	-
	Rops2g01170	115	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	1	105	IPR010987	-

Showing 1 to 7 of 7 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops2g01170	Rops-Chr2	16709060	16709407	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops2g01170	6	107	Glutathione S-transferase Gene Family	AT3G09270	32.353	1.78e-16	70.1

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops2g01170	K00799		-	tpra:123914566	189.119

Showing 1 to 1 of 1 entries