Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g01161 ATGATGAAGTGGAGTGGAAGAAAAAAGCCACCTTCAGCTTCTTCTTCTTCTAAGCCTTCTTTCATCTCTCATGTATCTCCTTTTTCATGGCTGTCAAAGTTTAAGCAGATGAGAATCAACTCAGAGGCAAAATCTGAGAAACTGAAGCAGAATGCAAAGAAGAATTCTCCACCTGAAGGTTCACCACAGTATGCTTATGGGAATAGAGGAAGGTTTTATGGAGGGGATGATGATGCTTTTTGGAGACTCTCATTTGGAGAAGAGGGTAATGAGCATAAGAAAAGTGAAGATTTTCTAAAACCAGCAATGTACAATTTGAATGCCGAGCATGTCATTCCAACCTCAAGTTACCCTAGTGGTAGAGTGAATGCTAGAAGACATGGAAGAAGAGAAGAAGGCACTCTGAAGTTCAGGCAGAAGGATATTGGACTAAAAGAAGGAGGAAAAATGCTGAATGAAACAACAAAGAGTGCAAAGGAACTTGAATGCTTAAGGAGGAGATATGAGAGGAAAGCAAATAGAGTTTTGCAAGAGCAACTCTTGAAATTTGAAAGAGCAGCAGAGGAAGCTGAATTTGCTTCAAGTAAATCCTCAGAAAAGGGTGAGCTCCAATTTGAATCACCTAGAACAATTTGCACACCAAGAACACATTTGTTTTCATCTTCTGCAGATGCAAAGAATTCTGAGAGGAAATTGGGCTGTGAGTGGCAGAATTTGAAACAAAGTGAGGGGTTGAAAGCAAAGGTTAACAAAAGGCAATCACTTCATGTGAGCAGAGAACTCCAGAGGAGGAAACCAAAGCACAGCTCCAAGGTAAGAGTATATTCTCCAAGGATGGCTTCCAAGGCTGAAAGCTGCAAAATAAAGGCCATAGAAGATAAGAAGAAAGCAAAACTAAAGATGAAGAAAGAAGAGGAGGAAATTGTGGAGGAAACACCAGGCTTAGATAGCTTTGCTGTGGTGAAATGTTCATTGGATCCACAACAAGATTTTAGAGATTCAATGATTGAGATGATCACAGAGAAACAAATCAGCCAGCCAGAAGAAATGGAAGAGCTGTTAGCATGTTATCTGGCTTTGAATTCTAGTGAGTACCATGATCTCATCATCAAAGCATTCAAACAGGTGTGGTTATATCTGAGCCAAGCTAGTTTGGGCACTAAATCAGATAAGCAATGTAGTTGCTATGATTAA 1194 0.3995 MMKWSGRKKPPSASSSSKPSFISHVSPFSWLSKFKQMRINSEAKSEKLKQNAKKNSPPEGSPQYAYGNRGRFYGGDDDAFWRLSFGEEGNEHKKSEDFLKPAMYNLNAEHVIPTSSYPSGRVNARRHGRREEGTLKFRQKDIGLKEGGKMLNETTKSAKELECLRRRYERKANRVLQEQLLKFERAAEEAEFASSKSSEKGELQFESPRTICTPRTHLFSSSADAKNSERKLGCEWQNLKQSEGLKAKVNKRQSLHVSRELQRRKPKHSSKVRVYSPRMASKAESCKIKAIEDKKKAKLKMKKEEEEIVEETPGLDSFAVVKCSLDPQQDFRDSMIEMITEKQISQPEEMEELLACYLALNSSEYHDLIIKAFKQVWLYLSQASLGTKSDKQCSCYD* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g01161 397 Pfam Transcriptional repressor, ovate 324 380 IPR006458 -
Rops2g01161 397 Coils Coil 151 193 - -
Rops2g01161 397 ProSiteProfiles OVATE domain profile. 320 379 IPR006458 -
Rops2g01161 397 MobiDBLite consensus disorder prediction 9 23 - -
Rops2g01161 397 Coils Coil 287 307 - -
Rops2g01161 397 MobiDBLite consensus disorder prediction 41 70 - -
Rops2g01161 397 MobiDBLite consensus disorder prediction 1 23 - -
Rops2g01161 397 NCBIfam uncharacterized plant-specific domain TIGR01568 319 381 IPR006458 -
Rops2g01161 397 MobiDBLite consensus disorder prediction 251 271 - -
Rops2g01161 397 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 208 382 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g01161 Rops-Chr2 16615642 16616835 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops2g01161 Ovate 5.2e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g01161 - - aprc:113859996 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g01161 2 16615642 16616835 Rops2g01161 2 16615642 16616835 ECH